RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PSAPP07602 524 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 GALTP07902 379 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 DARSP14868 501 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 TMOD1P28289 359 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 FUT2Q10981 343 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 DRP2Q13474 957 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 ZNF746Q6NUN9 644 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 DDX53Q86TM3 631 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 CRYGNQ8WXF5 182 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 RSAD2Q8WXG1 361 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 IGSF21Q96ID5 467 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 RTP3Q9BQQ7 232 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 TBC1D22BQ9NU19 505 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 IRAK3Q9Y616 596 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 R4GN57 208 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 ZNF862O60290 1169 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 SSBP05455 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 CFHP08603 1231 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 CYP3A4P08684 503 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 MYBP10242 640 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 KLRC2P26717 231 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 GIT2Q14161 759 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 CCDC149Q6ZUS6 474 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 SGMS1Q86VZ5 419 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 ZNF280BQ86YH2 543 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 SMAP1Q8IYB5 467 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 KIAA2013Q8IYS2 634 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 RIN2Q8WYP3 895 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 TCEANC2Q96MN5 208 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 KLHL5Q96PQ7 755 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 VN1R3Q9BXE9 311 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 GBP3Q9H0R5 595 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 NRBP2Q9NSY0 501 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 TBC1D13Q9NVG8 400 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 BARHL2Q9NY43 387 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 DACT1Q9NYF0 836 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 DNAJB4Q9UDY4 337 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 DUSP12Q9UNI6 340 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
NPLOC4-220ENST00000576940 ZNF292O60281 2723 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 KRBA1A5PL33 1030 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 B4GALT3O60512 393 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 N4BP1O75113 896 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 OFD1O75665 1012 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 LMNAP02545 664 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 CNPP09543 421 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 PHKA2P46019 1235 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 SLC11A1P49279 550 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 CLCN4P51793 760 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 PRR16Q569H4 304 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 SH2D3AQ9BRG2 576 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 SFXN1Q9H9B4 322 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 CHST12Q9NRB3 414 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 FAM217BQ9NTX9 383 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 RBM28Q9NW13 759 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 DMXL1Q9Y485 3027 aa11.43□□□□□ -0.58
NPLOC4-220ENST00000576940 A0A087WZ62 844 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 LILRB3O75022 631 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 DDHD2O94830 711 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 OATP04181 439 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 CDC27P30260 824 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 UGCGQ16739 394 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 RTN1Q16799 776 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 NOMO2Q5JPE7 1267 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 TWF2Q6IBS0 349 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 APOA5Q6Q788 366 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 DGLUCYQ7Z3D6 616 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 SLC44A3Q8N4M1 653 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 ST13P5Q8NFI4 369 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 GJA10Q969M2 543 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 FAM167AQ96KS9 214 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 FDXACB1Q9BRP7 624 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 GCOM2Q9BZD3 368 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 GLT8D2Q9H1C3 349 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 DISC1Q9NRI5 854 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 TCEAL9Q9UHQ7 104 aa11.42□□□□□ -0.58
NPLOC4-220ENST00000576940 CA14Q9ULX7 337 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms