RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC28A3Q9HAS3 691 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 PXMP2Q9NR77 195 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 SALL4Q9UJQ4 1053 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 DDX41Q9UJV9 622 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 RAD50Q92878 1312 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 PRUNE2Q8WUY3 3088 aa7.21□□□□□ -1.25
NUP88-212ENST00000576708 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 EPOPA6NHQ4 379 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 B4DLN1 442 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 E7EWF7 191 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 M0R082 166 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 IFIT3O14879 490 aaKnown RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 CYTH3O43739 400 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 EIF3JO75822 258 aaKnown RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 NEFLP07196 543 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 CA3P07451 260 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 ZNF286BP0CG31 522 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 HOXD8P13378 290 aaPredicted RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 IRS1P35568 1242 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 HSD17B4P51659 736 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 MRPL12P52815 198 aaKnown RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 ANTXR2P58335 489 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 ZNF200P98182 395 aaPredicted RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 SP2Q02086 613 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 GRM4Q14833 912 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 PCSK7Q16549 785 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 PTGISQ16647 500 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 KRT40Q6A162 431 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 ELMSAN1Q6PJG2 1045 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 MCF2L2Q86YR7 1114 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 ZNF417Q8TAU3 575 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 UBE2Q2Q8WVN8 375 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 WNT8BQ93098 351 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 PMEPA1Q969W9 287 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 MTMR8Q96EF0 704 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 ZNF587Q96SQ5 575 aaPredicted RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 IWS1Q96ST2 819 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 LPIN3Q9BQK8 851 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 PDCD2LQ9BRP1 358 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 SMG9Q9H0W8 520 aaKnown RBP7.21□□□□□ -1.26
NUP88-212ENST00000576708 PCDHA11Q9Y5I1 949 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 PCDHA1Q9Y5I3 950 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 CHD9Q3L8U1 2897 aa7.21□□□□□ -1.26
NUP88-212ENST00000576708 SCN10AQ9Y5Y9 1956 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 ZBTB5O15062 677 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 KIF4AO95239 1232 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 CASTP20810 708 aaKnown RBP7.2□□□□□ -1.26
NUP88-212ENST00000576708 CDK11BP21127 795 aaKnown RBP7.2□□□□□ -1.26
NUP88-212ENST00000576708 NT5C2P49902 561 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 PTPN11Q06124 597 aaPredicted RBP7.2□□□□□ -1.26
NUP88-212ENST00000576708 WTAPQ15007 396 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 PGM5Q15124 567 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 HSDL1Q3SXM5 330 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 SKAP1Q86WV1 359 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 HERC6Q8IVU3 1022 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 DHX37Q8IY37 1157 aaKnown RBP7.2□□□□□ -1.26
NUP88-212ENST00000576708 CEP120Q8N960 986 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 CCDC74AQ96AQ1 378 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 PLD4Q96BZ4 506 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 MYL10Q9BUA6 226 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
NUP88-212ENST00000576708 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 ENAMQ9NRM1 1142 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 TELO2Q9Y4R8 837 aa7.2□□□□□ -1.26
NUP88-212ENST00000576708 LCHNA4D1U4 455 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 GCOM1H8Y6P7 765 aaPredicted RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 HAS3O00219 553 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 SGSM2O43147 1006 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 NBNO60934 754 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RGS9O75916 674 aaPredicted RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 GGPS1O95749 300 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 PFKMP08237 780 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 POLR2MP0CAP2 368 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 ACTN1P12814 892 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 SELPP16109 830 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 UBA1P22314 1058 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 RFC2P35250 354 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 DEFB103AP81534 67 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 GHRHRQ02643 423 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 TAP1Q03518 808 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 TROAPQ12815 778 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 TRDNQ13061 729 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 BFSP2Q13515 415 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 DGKDQ16760 1214 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 KIAA0753Q2KHM9 967 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 TRIM71Q2Q1W2 868 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 CELF3Q5SZQ8 465 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 LRRC8DQ7L1W4 858 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RALYLQ86SE5 291 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 VSIG10LQ86VR7 867 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms