RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RNF149Q8NC42 400 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 MYLIPQ8WY64 445 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 ZNF668Q96K58 619 aaPredicted RBP15.09■□□□□ 0.01
CIITA-210ENST00000575513 NLRP4Q96MN2 994 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 MMTAG2Q9BU76 263 aaKnown RBP15.09■□□□□ 0.01
CIITA-210ENST00000575513 NT5C3AQ9H0P0 336 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 PRDM12Q9H4Q4 367 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
CIITA-210ENST00000575513 LRFN2Q9ULH4 789 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 RWDD3Q9Y3V2 267 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 CHD7Q9P2D1 2997 aa15.08■□□□□ 0
CIITA-210ENST00000575513 A0A087WWV3 80 aa15.08■□□□□ 0
CIITA-210ENST00000575513 A0A0U1RQF3 1178 aa15.08■□□□□ 0
CIITA-210ENST00000575513 ARHGEF35A5YM69 484 aa15.08■□□□□ 0
CIITA-210ENST00000575513 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
CIITA-210ENST00000575513 ARHGEF15O94989 841 aa15.08■□□□□ 0
CIITA-210ENST00000575513 EYA4O95677 639 aa15.08■□□□□ 0
CIITA-210ENST00000575513 EOMESO95936 686 aa15.08■□□□□ 0
CIITA-210ENST00000575513 FOSL2P15408 326 aa15.08■□□□□ 0
CIITA-210ENST00000575513 LONP1P36776 959 aaKnown RBP15.08■□□□□ 0
CIITA-210ENST00000575513 CMTR2Q8IYT2 770 aaKnown RBP15.08■□□□□ 0
CIITA-210ENST00000575513 FIBCD1Q8N539 461 aa15.08■□□□□ 0
CIITA-210ENST00000575513 RSPH1Q8WYR4 309 aa15.08■□□□□ 0
CIITA-210ENST00000575513 CLP1Q92989 425 aaKnown RBP15.08■□□□□ 0
CIITA-210ENST00000575513 DDX19AQ9NUU7 478 aaKnown RBP15.08■□□□□ 0
CIITA-210ENST00000575513 LMCD1Q9NZU5 365 aa15.08■□□□□ 0
CIITA-210ENST00000575513 PP2D1A8MPX8 630 aa15.07■□□□□ 0
CIITA-210ENST00000575513 RBAK-RBAKDNI3L0D1 243 aa15.07■□□□□ 0
CIITA-210ENST00000575513 HOXA2O43364 376 aa15.07■□□□□ 0
CIITA-210ENST00000575513 USO1O60763 962 aaKnown RBP15.07■□□□□ 0
CIITA-210ENST00000575513 CSDE1O75534 798 aaKnown RBP15.07■□□□□ 0
CIITA-210ENST00000575513 RB1P06400 928 aa15.07■□□□□ 0
CIITA-210ENST00000575513 SKIP12755 728 aa15.07■□□□□ 0
CIITA-210ENST00000575513 GLRA2P23416 452 aa15.07■□□□□ 0
CIITA-210ENST00000575513 CDC25AP30304 524 aa15.07■□□□□ 0
CIITA-210ENST00000575513 AXLP30530 894 aa15.07■□□□□ 0
CIITA-210ENST00000575513 PTPAQ15257 358 aa15.07■□□□□ 0
CIITA-210ENST00000575513 CATSPER4Q7RTX7 472 aa15.07■□□□□ 0
CIITA-210ENST00000575513 ARNTL2Q8WYA1 636 aa15.07■□□□□ 0
CIITA-210ENST00000575513 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
CIITA-210ENST00000575513 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
CIITA-210ENST00000575513 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
CIITA-210ENST00000575513 PTPRSQ13332 1948 aa15.07■□□□□ 0
CIITA-210ENST00000575513 C5orf67F2Z3F1 127 aa15.06■□□□□ 0
CIITA-210ENST00000575513 ZNF623O75123 536 aa15.06■□□□□ 0
CIITA-210ENST00000575513 UBA7P41226 1012 aa15.06■□□□□ 0
CIITA-210ENST00000575513 RAB27AP51159 221 aa15.06■□□□□ 0
CIITA-210ENST00000575513 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
CIITA-210ENST00000575513 BTG3Q14201 252 aaPredicted RBP15.06■□□□□ 0
CIITA-210ENST00000575513 ADGRE1Q14246 886 aa15.06■□□□□ 0
CIITA-210ENST00000575513 ECHDC2Q86YB7 292 aa15.06■□□□□ 0
CIITA-210ENST00000575513 TMEM192Q8IY95 271 aa15.06■□□□□ 0
CIITA-210ENST00000575513 ASAP3Q8TDY4 903 aa15.06■□□□□ 0
CIITA-210ENST00000575513 KIFAP3Q92845 792 aa15.06■□□□□ 0
CIITA-210ENST00000575513 TIPINQ9BVW5 301 aa15.06■□□□□ 0
CIITA-210ENST00000575513 PLVAPQ9BX97 442 aa15.06■□□□□ 0
CIITA-210ENST00000575513 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
CIITA-210ENST00000575513 MINDY3Q9H8M7 445 aa15.06■□□□□ 0
CIITA-210ENST00000575513 AGPAT5Q9NUQ2 364 aa15.06■□□□□ 0
CIITA-210ENST00000575513 KCND2Q9NZV8 630 aa15.06■□□□□ 0
CIITA-210ENST00000575513 SRPRBQ9Y5M8 271 aaKnown RBP15.06■□□□□ 0
CIITA-210ENST00000575513 CLIC4Q9Y696 253 aa15.06■□□□□ 0
CIITA-210ENST00000575513 FGFR4P22455 802 aa15.05■□□□□ -0
CIITA-210ENST00000575513 HOXA11P31270 313 aaPredicted RBP15.05■□□□□ -0
CIITA-210ENST00000575513 BMPR1AP36894 532 aa15.05■□□□□ -0
CIITA-210ENST00000575513 CAPSQ13938 189 aa15.05■□□□□ -0
CIITA-210ENST00000575513 SLC39A14Q15043 492 aa15.05■□□□□ -0
CIITA-210ENST00000575513 PPP2R5AQ15172 486 aa15.05■□□□□ -0
CIITA-210ENST00000575513 EPC2Q52LR7 807 aa15.05■□□□□ -0
CIITA-210ENST00000575513 NAALADL2Q58DX5 795 aa15.05■□□□□ -0
CIITA-210ENST00000575513 FAM102BQ5T8I3 360 aa15.05■□□□□ -0
CIITA-210ENST00000575513 ZNF598Q86UK7 904 aaKnown RBP15.05■□□□□ -0
CIITA-210ENST00000575513 MAFAQ8NHW3 353 aaPredicted RBP15.05■□□□□ -0
CIITA-210ENST00000575513 CCDC51Q96ER9 411 aa15.05■□□□□ -0
CIITA-210ENST00000575513 CALML4Q96GE6 196 aa15.05■□□□□ -0
CIITA-210ENST00000575513 CDK5RAP3Q96JB5 506 aa15.05■□□□□ -0
CIITA-210ENST00000575513 CERS4Q9HA82 394 aa15.05■□□□□ -0
CIITA-210ENST00000575513 KCNG1Q9UIX4 513 aa15.05■□□□□ -0
CIITA-210ENST00000575513 PIN4Q9Y237 131 aaKnown RBP15.05■□□□□ -0
CIITA-210ENST00000575513 GBF1Q92538 1859 aa15.05■□□□□ -0
CIITA-210ENST00000575513 COL6A3P12111 3177 aa15.05■□□□□ -0
CIITA-210ENST00000575513 LOXHD1Q8IVV2 1947 aa15.04■□□□□ -0
CIITA-210ENST00000575513 EPOPA6NHQ4 379 aa15.04■□□□□ -0
CIITA-210ENST00000575513 E9PMD0 336 aa15.04■□□□□ -0
CIITA-210ENST00000575513 H3BNC9 293 aa15.04■□□□□ -0
CIITA-210ENST00000575513 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 LPXNO60711 386 aa15.04■□□□□ -0
CIITA-210ENST00000575513 ERLIN2O94905 339 aa15.04■□□□□ -0
CIITA-210ENST00000575513 LINC00271P0C7V0 271 aa15.04■□□□□ -0
CIITA-210ENST00000575513 ZSCAN22P10073 491 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 NAMPTP43490 491 aa15.04■□□□□ -0
CIITA-210ENST00000575513 NASPP49321 788 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 MBTD1Q05BQ5 628 aa15.04■□□□□ -0
CIITA-210ENST00000575513 GRB10Q13322 594 aa15.04■□□□□ -0
CIITA-210ENST00000575513 FAM187BQ17R55 369 aa15.04■□□□□ -0
CIITA-210ENST00000575513 TMEM119Q4V9L6 283 aa15.04■□□□□ -0
CIITA-210ENST00000575513 CDCA2Q69YH5 1023 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 ATL3Q6DD88 541 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms