RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMG6-218ENST00000575454 CLCN3P51790 818 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 GLB1LQ6UWU2 654 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 TMC5Q6UXY8 1006 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 CYP26C1Q6V0L0 522 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 C15orf39Q6ZRI6 1047 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 MICU3Q86XE3 530 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 HELQQ8TDG4 1101 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 SLC22A17Q8WUG5 538 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 NLRP7Q8WX94 980 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 NXPE3Q969Y0 559 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 IGSF21Q96ID5 467 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 PGBD1Q96JS3 809 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 GCOM2Q9BZD3 368 aaPredicted RBP10.18□□□□□ -0.78
SMG6-218ENST00000575454 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
SMG6-218ENST00000575454 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 KCNK12Q9HB15 430 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 GABBR1Q9UBS5 961 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 WNT16Q9UBV4 365 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 DUSP12Q9UNI6 340 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
SMG6-218ENST00000575454 ANKRD11Q6UB99 2663 aaPredicted RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 STK25O00506 426 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 ZC3H11AO75152 810 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG6-218ENST00000575454 EPCAMP16422 314 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 NPR3P17342 541 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG6-218ENST00000575454 KLRC2P26717 231 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 DNM2P50570 870 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 GPC3P51654 580 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 RNASELQ05823 741 aaKnown RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 TBC1D8BQ0IIM8 1120 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 CWF19L1Q69YN2 538 aaKnown RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 ZC3H14Q6PJT7 736 aaKnown RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 SIX5Q8N196 739 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 LINC01465Q8N7H1 131 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 CCDC12Q8WUD4 166 aaPredicted RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 STAMQ92783 540 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 SAMM50Q9Y512 469 aa10.17□□□□□ -0.78
SMG6-218ENST00000575454 EP300Q09472 2414 aaPredicted RBP10.17□□□□□ -0.78
SMG6-218ENST00000575454 SPTBN2O15020 2390 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 IGLV3-22A0A075B6J6 115 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 NT5C1B-RDH14C9J2C7 533 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 PI15O43692 258 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 OATP04181 439 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 GALTP07902 379 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 PHKA2P46019 1235 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 RAB27AP51159 221 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 RTN1Q16799 776 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 LETM2Q2VYF4 491 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 NOMO2Q5JPE7 1267 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 TRMT1LQ7Z2T5 733 aaKnown RBP10.16□□□□□ -0.78
SMG6-218ENST00000575454 DGLUCYQ7Z3D6 616 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 RAB11FIP4Q86YS3 637 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 CMASQ8NFW8 434 aaPredicted RBP10.16□□□□□ -0.78
SMG6-218ENST00000575454 PGBD4Q96DM1 585 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 BORCS6Q96GS4 357 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 RHOBTB2Q9BYZ6 727 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 SSX2IPQ9Y2D8 614 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 KMT2EQ8IZD2 1858 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 CEP250Q9BV73 2442 aa10.16□□□□□ -0.78
SMG6-218ENST00000575454 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 SLC27A2O14975 620 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 ZBTB43O43298 467 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 ZNF623O75123 536 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 ALDH2P05091 517 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 GNA11P29992 359 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 SFNP31947 248 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 RCAN1P53805 252 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 PUM1Q14671 1186 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMG6-218ENST00000575454 PTPN14Q15678 1187 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 JAKMIP3Q5VZ66 844 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
SMG6-218ENST00000575454 APOA5Q6Q788 366 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 URGCPQ8TCY9 931 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 CRYGNQ8WXF5 182 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 AUTS2Q8WXX7 1259 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 KLHL5Q96PQ7 755 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 C6orf50Q9HD87 102 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 DISC1Q9NRI5 854 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 MRPL17Q9NRX2 175 aaKnown RBP10.15□□□□□ -0.78
SMG6-218ENST00000575454 TBC1D13Q9NVG8 400 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 KANSL3Q9P2N6 904 aa10.15□□□□□ -0.78
SMG6-218ENST00000575454 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 C1RP00736 705 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 CIITAP33076 1130 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 CLCN4P51793 760 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 JAK3P52333 1124 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 PRKCEQ02156 737 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 FUT2Q10981 343 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 PRR16Q569H4 304 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 CREB3L3Q68CJ9 461 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 KANK3Q6NY19 840 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms