RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 MAEAQ7L5Y9 396 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 IL25Q9H293 177 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 SNRKQ9NRH2 765 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 GID8Q9NWU2 228 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 LIMD1Q9UGP4 676 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 NFS1Q9Y697 457 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 METP08581 1390 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
TOM1L1-220ENST00000575333 A0A0U1RQJ8 604 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 ADGRB1O14514 1584 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 ENC1O14682 589 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 GYPCP04921 128 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 IL4RP24394 825 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 CTNNA1P35221 906 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 GALK1P51570 392 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 ARFIP2P53365 341 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 FUT2Q10981 343 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 ACVR2BQ13705 512 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TOB2Q14106 344 aaPredicted RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 RASA2Q15283 850 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 WDR45BQ5MNZ6 344 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 SNX30Q5VWJ9 437 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TMEM132EQ6IEE7 984 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TTC23LQ6PF05 361 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 KLHL35Q6PF15 583 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 SLC4A10Q6U841 1118 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 KRT27Q7Z3Y8 459 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 N4BP2Q86UW6 1770 aaPredicted RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 SFR1Q86XK3 245 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 MCF2L2Q86YR7 1114 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 FAM133AQ8N9E0 248 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 EME1Q96AY2 570 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 GRAMD1AQ96CP6 724 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 COX4I2Q96KJ9 171 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TCF12Q99081 682 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 DHX36Q9H2U1 1008 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 PLGRKTQ9HBL7 147 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 AIPL1Q9NZN9 384 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 HPSEQ9Y251 543 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 TRIM17Q9Y577 477 aa8.55□□□□□ -1.04
TOM1L1-220ENST00000575333 UMODL1Q5DID0 1318 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 GNAT3A8MTJ3 354 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ADCY3O60266 1144 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SRGAP2O75044 1071 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 LGR5O75473 907 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 DGKIO75912 1065 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 EYA4O95677 639 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SPATA31D3P0C874 917 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ZNF12P17014 697 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 KCNA6P17658 529 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 PLCD1P51178 756 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 PPP4CP60510 307 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 HSPA14Q0VDF9 509 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 CFAP221Q4G0U5 840 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MAP3K21Q5TCX8 1036 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 LRRC74BQ6ZQY2 392 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SPATA31D4Q6ZUB0 917 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 LURAP1LQ8IV03 231 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 RIBC1Q8N443 379 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 PYROXD1Q8WU10 500 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NELFBQ8WX92 580 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ELAC2Q9BQ52 826 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 DDX23Q9BUQ8 820 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NUF2Q9BZD4 464 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 C14orf93Q9H972 538 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 WBP1LQ9NX94 342 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 STK17AQ9UEE5 414 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NFU1Q9UMS0 254 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MYH8P13535 1937 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 RASA4BC9J798 803 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 E9PMD0 336 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 TRAFD1O14545 582 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 RASA4O43374 803 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 A1BGP04217 495 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 HSD17B3P37058 310 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MMP13P45452 471 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 CLK2P49760 499 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MAGOHP61326 146 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 GUCA2AQ02747 115 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SLC34A1Q06495 639 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms