RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 JPH2Q9BR39 696 aaPredicted RBP11.83□□□□□ -0.52
LITAF-216ENST00000574848 LXNQ9BS40 222 aa11.83□□□□□ -0.52
LITAF-216ENST00000574848 NSUN3Q9H649 340 aaKnown RBP11.83□□□□□ -0.52
LITAF-216ENST00000574848 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
LITAF-216ENST00000574848 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
LITAF-216ENST00000574848 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
LITAF-216ENST00000574848 WNT7AO00755 349 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 GAS2O43903 313 aaKnown RBP11.82□□□□□ -0.52
LITAF-216ENST00000574848 NEMFO60524 1076 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 LYPLA2O95372 231 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 RFC5P40937 340 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 KCNQ1P51787 676 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 ZNF445P59923 1031 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 ORC2Q13416 577 aaPredicted RBP11.82□□□□□ -0.52
LITAF-216ENST00000574848 FOXD4L6Q3SYB3 417 aaPredicted RBP11.82□□□□□ -0.52
LITAF-216ENST00000574848 PLA2G4FQ68DD2 849 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 FOXD4L3Q6VB84 417 aaPredicted RBP11.82□□□□□ -0.52
LITAF-216ENST00000574848 FERMT3Q86UX7 667 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 EXOC8Q8IYI6 725 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 GPT2Q8TD30 523 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 MTMR9Q96QG7 549 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 DHX33Q9H6R0 707 aaKnown RBP11.82□□□□□ -0.52
LITAF-216ENST00000574848 LRFN2Q9ULH4 789 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 PCDHB7Q9Y5E2 793 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
LITAF-216ENST00000574848 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 TNFRSF10AO00220 468 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 GRM6O15303 877 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 HOXA2O43364 376 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 GATMP50440 423 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 DNM2P50570 870 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
LITAF-216ENST00000574848 CAMK1Q14012 370 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 CALCRLQ16602 461 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 ZSCAN23Q3MJ62 389 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 NCAPH2Q6IBW4 605 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 NLRP7Q8WX94 980 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 PABPC5Q96DU9 382 aaKnown RBP11.81□□□□□ -0.52
LITAF-216ENST00000574848 UHRF1Q96T88 793 aaPredicted RBP11.81□□□□□ -0.52
LITAF-216ENST00000574848 ZSWIM4Q9H7M6 989 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 RNF19AQ9NV58 838 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 PLAGL2Q9UPG8 496 aa11.81□□□□□ -0.52
LITAF-216ENST00000574848 NCOR1O75376 2440 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 A0A0U1RQF3 1178 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 ITGB1P05556 798 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 ATF7P17544 494 aaPredicted RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 SFPQP23246 707 aaKnown RBP eCLIP11.8□□□□□ -0.52
LITAF-216ENST00000574848 YWHABP31946 246 aaKnown RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 NPEPPSP55786 919 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 UBE3AQ05086 875 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 CTC1Q2NKJ3 1217 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 DYDC2Q96IM9 177 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 CEP170P1Q96L14 293 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 SCLT1Q96NL6 688 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 SH2D3AQ9BRG2 576 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 GCOM2Q9BZD3 368 aaPredicted RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 FOXP1Q9H334 677 aaPredicted RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 CHST12Q9NRB3 414 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 DACT1Q9NYF0 836 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
LITAF-216ENST00000574848 PCDHA12Q9UN75 941 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 BDP1A6H8Y1 2624 aa11.8□□□□□ -0.52
LITAF-216ENST00000574848 TCF20Q9UGU0 1960 aaKnown RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 A0A087WZ62 844 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 TBKBP1A7MCY6 615 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 NCK2O43639 380 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 MARCH6O60337 910 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 SLITRK3O94933 977 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 EOMESO95936 686 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 FGFR1P11362 822 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 EMC2Q15006 297 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
LITAF-216ENST00000574848 FAM102BQ5T8I3 360 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 SPPL3Q8TCT6 385 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms