RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CLEC1BQ9P126 229 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 BARX2Q9UMQ3 279 aaPredicted RBP23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 TRIOO75962 3097 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 A0A0U1RQF3 1178 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 MAFO75444 373 aaPredicted RBP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 SFPQP23246 707 aaKnown RBP eCLIP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 CLLU1OSQ5K130 101 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 PLPP4Q5VZY2 271 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 KCNT2Q6UVM3 1135 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 HELQQ8TDG4 1101 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 MRPS27Q92552 414 aaKnown RBP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 NLRP4Q96MN2 994 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 NAP1L4Q99733 375 aaKnown RBP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 JPH2Q9BR39 696 aaPredicted RBP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 PUF60Q9UHX1 559 aaKnown RBP23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 HCN4Q9Y3Q4 1203 aa23.69■■□□□ 1.38
CHRNB1-206ENST00000574054 C19orf67A6NJJ6 358 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 DCXO43602 365 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 DKC1O60832 514 aaKnown RBP eCLIP23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 GLP2RO95838 553 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 EOMESO95936 686 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 PPM1AP35813 382 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 NPEPPSP55786 919 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 EARS2Q5JPH6 523 aaKnown RBP23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 NCAPH2Q6IBW4 605 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 PDE12Q6L8Q7 609 aaKnown RBP23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 ZNF410Q86VK4 478 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 POTEDQ86YR6 584 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 KSR1Q8IVT5 923 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 CEP170P1Q96L14 293 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 BRMS1Q9HCU9 246 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 ENTPD7Q9NQZ7 604 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 CYP26B1Q9NR63 512 aa23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 PIN4Q9Y237 131 aaKnown RBP23.68■■□□□ 1.38
CHRNB1-206ENST00000574054 FAM205CA6NFA0 338 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 FSCN2O14926 492 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 P4HBP07237 508 aaKnown RBP23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 ATF7P17544 494 aaPredicted RBP23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 KRT2P35908 639 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 NR5A1Q13285 461 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 TWF2Q6IBS0 349 aaKnown RBP23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 CATSPER4Q7RTX7 472 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 ZNF598Q86UK7 904 aaKnown RBP23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 SMRP1Q8NCR6 262 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 SLC7A3Q8WY07 619 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 HAS1Q92839 578 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 TCF25Q9BQ70 676 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 INO80BQ9C086 356 aaPredicted RBP23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 CHST12Q9NRB3 414 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 SPG21Q9NZD8 308 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 LZTS1Q9Y250 596 aa23.67■■□□□ 1.38
CHRNB1-206ENST00000574054 TBX3O15119 743 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 LARGE1O95461 756 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 EYA4O95677 639 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 FOSBP53539 338 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 POLGP54098 1239 aaPredicted RBP23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 RBM10P98175 930 aaKnown RBP23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 PLCB3Q01970 1234 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 KRT17Q04695 432 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 COASYQ13057 564 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 DUSP6Q16828 381 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 LONRF3Q496Y0 759 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 GTF3C6Q969F1 213 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 CDCA3Q99618 268 aaPredicted RBP23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 LXNQ9BS40 222 aa23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 BMP2KQ9NSY1 1161 aaPredicted RBP23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 WRAP73Q9P2S5 460 aaPredicted RBP23.66■■□□□ 1.38
CHRNB1-206ENST00000574054 BAG4O95429 457 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 PHKA2P46019 1235 aa23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 EPHA7Q15375 998 aa23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 ME3Q16798 604 aa23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 ZNF579Q8NAF0 562 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 FAM122AQ96E09 287 aa23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 MRPL9Q9BYD2 267 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 USP15Q9Y4E8 981 aaPredicted RBP23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 COL4A3BPQ9Y5P4 624 aa23.65■■□□□ 1.38
CHRNB1-206ENST00000574054 FSD2A1L4K1 749 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 FDPSP14324 419 aaKnown RBP23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 CYP4A11Q02928 519 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 TMC7Q7Z402 723 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 EXOC8Q8IYI6 725 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 SLFN12Q8IYM2 578 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 VN1R2Q8NFZ6 395 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 LPPQ93052 612 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 TMEM143Q96AN5 459 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 DYDC2Q96IM9 177 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 RGL1Q9NZL6 768 aa23.64■■□□□ 1.37
CHRNB1-206ENST00000574054 PRR33A8MZF0 331 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 SRGAP2CP0DJJ0 459 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 SRGAP2BP0DMP2 458 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 SKIP12755 728 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 YWHABP31946 246 aaKnown RBP23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 PLA2G5P39877 138 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 RFC5P40937 340 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 NEK4P51957 841 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 CTTNQ14247 550 aaKnown RBP23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 LLGL2Q6P1M3 1020 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 PRPF31Q8WWY3 499 aaKnown RBP23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 PSPC1Q8WXF1 523 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms