RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 RINT1Q6NUQ1 792 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 TMEM40Q8WWA1 233 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 ZNF668Q96K58 619 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 DRC1Q96MC2 740 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 PYM1Q9BRP8 204 aaKnown RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 AGO3Q9H9G7 860 aaKnown RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 CXXC1Q9P0U4 656 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 RANBP2P49792 3224 aaKnown RBP14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 STAT6P42226 847 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 SLC12A3P55017 1021 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 KCNK18Q7Z418 384 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 FAM228AQ86W67 206 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 ZBTB8OSQ8IWT0 167 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 LEO1Q8WVC0 666 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 RAD54LQ92698 747 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 C2orf40Q9H1Z8 148 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 C17orf75Q9HAS0 396 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 ERVK-5Q9HDB9 667 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 CHST12Q9NRB3 414 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 PCDHA7Q9UN72 937 aa14.14□□□□□ -0.15
TRAPPC1-206ENST00000573989 LRRIQ4A6NIV6 560 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 ERLIN2O94905 339 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 KRT18P05783 430 aaKnown RBP14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 GLRA2P23416 452 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 GUCY2CP25092 1073 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 NAMPTP43490 491 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 PTENP60484 403 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 DMP1Q13316 513 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 CAPSQ13938 189 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 RAB30Q15771 203 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 C1orf186Q6ZWK4 172 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 USP49Q70CQ1 688 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 SV2BQ7L1I2 683 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 GPBP1Q86WP2 473 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 MYOCDQ8IZQ8 938 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 OSBPL7Q9BZF2 842 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 GPRC5CQ9NQ84 441 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 C1orf112Q9NSG2 853 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 CHMP5Q9NZZ3 219 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 MSRAQ9UJ68 235 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 TTC3P53804 2025 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 PHLPP2Q6ZVD8 1323 aa14.13□□□□□ -0.15
TRAPPC1-206ENST00000573989 GBF1Q92538 1859 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 INO80B-WBP1J3KQ70 363 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 ENPP3O14638 875 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 SMTNP53814 917 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 DHX8Q14562 1220 aaKnown RBP14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 AXDND1Q5T1B0 1012 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 ADALQ6DHV7 355 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 PDILTQ8N807 584 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 IQUBQ8NA54 791 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 DEPTORQ8TB45 409 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 ASAP3Q8TDY4 903 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 ADAM2Q99965 735 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 RUSC1Q9BVN2 902 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 BLOC1S4Q9NUP1 217 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 LARSQ9P2J5 1176 aaKnown RBP14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 ODF2LQ9ULJ1 636 aa14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
TRAPPC1-206ENST00000573989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 GOLGA6L4A6NEF3 574 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 TLL1O43897 1013 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 HIP1RO75146 1068 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 SKIP12755 728 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 AXLP30530 894 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 EFNA5P52803 228 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 AMPD3Q01432 767 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 MCM6Q14566 821 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 TCTN1Q2MV58 587 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 RESP18Q5W5W9 173 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 GPR153Q6NV75 609 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 SHC4Q6S5L8 630 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 SLC24A5Q71RS6 500 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 TOP1MTQ969P6 601 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 PANK2Q9BZ23 570 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 MAGEF1Q9HAY2 307 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 RGS18Q9NS28 235 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 LRFN2Q9ULH4 789 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 PIN4Q9Y237 131 aaKnown RBP14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 PCDHA11Q9Y5I1 949 aa14.11□□□□□ -0.15
TRAPPC1-206ENST00000573989 CCDC169A6NNP5 214 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 H0YCG3 227 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 TBCAO75347 108 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms