RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 FAM43BQ6ZT52 329 aaPredicted RBP30.89■■■□□ 2.54
SCARF1-207ENST00000573867 CCDC43Q96MW1 224 aaKnown RBP30.89■■■□□ 2.54
SCARF1-207ENST00000573867 GPRC5CQ9NQ84 441 aa30.89■■■□□ 2.54
SCARF1-207ENST00000573867 STAG3L1P0CL83 205 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 MUTP22033 750 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 FAM173BQ6P4H8 233 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 HSCBQ8IWL3 235 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 RNF149Q8NC42 400 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 KIAA1024Q9UPX6 916 aa30.88■■■□□ 2.53
SCARF1-207ENST00000573867 MAEAQ7L5Y9 396 aa30.87■■■□□ 2.53
SCARF1-207ENST00000573867 FIBCD1Q8N539 461 aa30.87■■■□□ 2.53
SCARF1-207ENST00000573867 RAB34Q9BZG1 259 aa30.87■■■□□ 2.53
SCARF1-207ENST00000573867 DDX19AQ9NUU7 478 aaKnown RBP30.87■■■□□ 2.53
SCARF1-207ENST00000573867 RNF19AQ9NV58 838 aa30.87■■■□□ 2.53
SCARF1-207ENST00000573867 VWA3AA6NCI4 1184 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 SFPQP23246 707 aaKnown RBP eCLIP30.86■■■□□ 2.53
SCARF1-207ENST00000573867 GLRA2P23416 452 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 CAPSQ13938 189 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 BTG3Q14201 252 aaPredicted RBP30.86■■■□□ 2.53
SCARF1-207ENST00000573867 PAN2Q504Q3 1202 aaKnown RBP30.86■■■□□ 2.53
SCARF1-207ENST00000573867 EPC2Q52LR7 807 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 FAM102BQ5T8I3 360 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 POLR3FQ9H1D9 316 aaPredicted RBP30.86■■■□□ 2.53
SCARF1-207ENST00000573867 LRFN2Q9ULH4 789 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 PCDHB7Q9Y5E2 793 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 MTCH2Q9Y6C9 303 aa30.86■■■□□ 2.53
SCARF1-207ENST00000573867 ASAP2O43150 1006 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 ZSCAN20P17040 1043 aaPredicted RBP30.85■■■□□ 2.53
SCARF1-207ENST00000573867 SF3A1Q15459 793 aaKnown RBP30.85■■■□□ 2.53
SCARF1-207ENST00000573867 ARL6IP4Q66PJ3 421 aaKnown RBP30.85■■■□□ 2.53
SCARF1-207ENST00000573867 PADI6Q6TGC4 694 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 CATSPER4Q7RTX7 472 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 KCNK18Q7Z418 384 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 ECHDC2Q86YB7 292 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 TMEM192Q8IY95 271 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 INO80BQ9C086 356 aaPredicted RBP30.85■■■□□ 2.53
SCARF1-207ENST00000573867 TMEM161AQ9NX61 479 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 MRPL42Q9Y6G3 142 aaKnown RBP30.85■■■□□ 2.53
SCARF1-207ENST00000573867 UNC80Q8N2C7 3258 aa30.85■■■□□ 2.53
SCARF1-207ENST00000573867 ARHGEF35A5YM69 484 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 FGFR1P11362 822 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 ATF7P17544 494 aaPredicted RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 POU3F3P20264 500 aaPredicted RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 GRIN1Q05586 938 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 MXD4Q14582 209 aaPredicted RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 KRT79Q5XKE5 535 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 SRGAP1Q7Z6B7 1085 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 CMTR2Q8IYT2 770 aaKnown RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 FBXO22Q8NEZ5 403 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 CLP1Q92989 425 aaKnown RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 BHMT2Q9H2M3 363 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 ELAC1Q9H777 363 aaKnown RBP30.84■■■□□ 2.53
SCARF1-207ENST00000573867 CLIC4Q9Y696 253 aa30.84■■■□□ 2.53
SCARF1-207ENST00000573867 NLRC5Q86WI3 1866 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 E9PMD0 336 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 STX6O43752 255 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 PTENP60484 403 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 PNMA5Q96PV4 448 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 AGPAT5Q9NUQ2 364 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 HCSTQ9UBK5 93 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 PIN4Q9Y237 131 aaKnown RBP30.83■■■□□ 2.53
SCARF1-207ENST00000573867 STK24Q9Y6E0 443 aa30.83■■■□□ 2.53
SCARF1-207ENST00000573867 CYP11B2P19099 503 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 CCDC85BQ15834 202 aaPredicted RBP30.82■■■□□ 2.52
SCARF1-207ENST00000573867 ZNF598Q86UK7 904 aaKnown RBP30.82■■■□□ 2.52
SCARF1-207ENST00000573867 IFNLR1Q8IU57 520 aaPredicted RBP30.82■■■□□ 2.52
SCARF1-207ENST00000573867 PPM1EQ8WY54 764 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 BSNDQ8WZ55 320 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 SAMD11Q96NU1 681 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 POLD4Q9HCU8 107 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 CHST12Q9NRB3 414 aa30.82■■■□□ 2.52
SCARF1-207ENST00000573867 RALGAPA2Q2PPJ7 1873 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 A0A0U1RQF3 1178 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 HOXA11P31270 313 aaPredicted RBP30.81■■■□□ 2.52
SCARF1-207ENST00000573867 PHKA2P46019 1235 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 PTPAQ15257 358 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 HYIQ5T013 277 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 MCPH1Q8NEM0 835 aa30.81■■■□□ 2.52
SCARF1-207ENST00000573867 FNDC1Q4ZHG4 1894 aaPredicted RBP30.8■■■□□ 2.52
SCARF1-207ENST00000573867 KIAA1671Q9BY89 1806 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 CTNNB1P35222 781 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 MBTD1Q05BQ5 628 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 POU5F1BQ06416 359 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 MICALL1Q8N3F8 863 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 TRAIPQ9BWF2 469 aa30.8■■■□□ 2.52
SCARF1-207ENST00000573867 TBKBP1A7MCY6 615 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 EYA4O95677 639 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 BMP15O95972 392 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 BMPR1AP36894 532 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 TFDP1Q14186 410 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 AMHR2Q16671 573 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 TWF2Q6IBS0 349 aaKnown RBP30.79■■■□□ 2.52
SCARF1-207ENST00000573867 PRDM6Q9NQX0 595 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 DACT1Q9NYF0 836 aa30.79■■■□□ 2.52
SCARF1-207ENST00000573867 C5orf67F2Z3F1 127 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 H3BNC9 293 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 TSPAN1O60635 241 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 ZRSR1Q15695 479 aaKnown RBP30.78■■■□□ 2.52
SCARF1-207ENST00000573867 CLLU1OSQ5K130 101 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 RNF169Q8NCN4 708 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms