RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
TVP23A-208ENST00000573857 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 ZNF558Q96NG5 402 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 CDCA3Q99618 268 aaPredicted RBP16.06■□□□□ 0.16
TVP23A-208ENST00000573857 SLKQ9H2G2 1235 aaPredicted RBP16.06■□□□□ 0.16
TVP23A-208ENST00000573857 KCNMB3Q9NPA1 279 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
TVP23A-208ENST00000573857 VAV3Q9UKW4 847 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 TPCN1Q9ULQ1 816 aa16.06■□□□□ 0.16
TVP23A-208ENST00000573857 A0A087WZ62 844 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 EML1O00423 815 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 PFKFB2O60825 505 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 MAFO75444 373 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 XBP1P17861 261 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 PBX3P40426 434 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 PLA2G4FQ68DD2 849 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 ZNF410Q86VK4 478 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 FDXACB1Q9BRP7 624 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 CHST12Q9NRB3 414 aa16.05■□□□□ 0.16
TVP23A-208ENST00000573857 SUCLA2Q9P2R7 463 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 USP15Q9Y4E8 981 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-208ENST00000573857 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
TVP23A-208ENST00000573857 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
TVP23A-208ENST00000573857 HERC4Q5GLZ8 1057 aaPredicted RBP16.04■□□□□ 0.16
TVP23A-208ENST00000573857 RHPN2Q8IUC4 686 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 RNF135Q8IUD6 432 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 HELQQ8TDG4 1101 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 JPH2Q9BR39 696 aaPredicted RBP16.04■□□□□ 0.16
TVP23A-208ENST00000573857 TRAIPQ9BWF2 469 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 GJB4Q9NTQ9 266 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 SPG21Q9NZD8 308 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
TVP23A-208ENST00000573857 MUC6Q6W4X9 2439 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 DTNBO60941 627 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 CTDNEP1O95476 244 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 PHKA2P46019 1235 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 ANAPC15P60006 121 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 KRT17Q04695 432 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 KCNC3Q14003 757 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 HAS1Q92839 578 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 NLRP4Q96MN2 994 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 CYP26B1Q9NR63 512 aa16.03■□□□□ 0.16
TVP23A-208ENST00000573857 WRAP73Q9P2S5 460 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 PIN4Q9Y237 131 aaKnown RBP16.03■□□□□ 0.16
TVP23A-208ENST00000573857 HIDE1A8MVS5 230 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 LOC730098B7Z3J9 87 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 TBX3O15119 743 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 AK2P54819 239 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 NPEPPSP55786 919 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 EARS2Q5JPH6 523 aaKnown RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 TWF2Q6IBS0 349 aaKnown RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 TMEM184AQ6ZMB5 413 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 KSR1Q8IVT5 923 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 SLC39A11Q8N1S5 342 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 SLC7A3Q8WY07 619 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 SUSD6Q92537 303 aa16.02■□□□□ 0.16
TVP23A-208ENST00000573857 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.16
TVP23A-208ENST00000573857 SRGAP2BP0DMP2 458 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 SKIP12755 728 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 BCAR1P56945 870 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 CBX2Q14781 532 aaPredicted RBP16.01■□□□□ 0.15
TVP23A-208ENST00000573857 TMC7Q7Z402 723 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
TVP23A-208ENST00000573857 WASF1Q92558 559 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 CEP170P1Q96L14 293 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
TVP23A-208ENST00000573857 RFC5P40937 340 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 TECP42680 631 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
TVP23A-208ENST00000573857 POLGP54098 1239 aaPredicted RBP16■□□□□ 0.15
TVP23A-208ENST00000573857 SPIRE1Q08AE8 756 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 SMC1AQ14683 1233 aaKnown RBP16■□□□□ 0.15
TVP23A-208ENST00000573857 EPHA7Q15375 998 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 LONRF3Q496Y0 759 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 ANKRD54Q6NXT1 300 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 LLGL2Q6P1M3 1020 aa16■□□□□ 0.15
TVP23A-208ENST00000573857 GLB1LQ6UWU2 654 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms