RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PCDHA12Q9UN75 941 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 ARID2Q68CP9 1835 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 BAG4O95429 457 aaKnown RBP19.49■□□□□ 0.71
SMG6-214ENST00000573827 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMG6-214ENST00000573827 RFC5P40937 340 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 DNM2P50570 870 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 TRIM29Q14134 588 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 POF1BQ8WVV4 589 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 PRPF31Q8WWY3 499 aaKnown RBP19.49■□□□□ 0.71
SMG6-214ENST00000573827 TMEM143Q96AN5 459 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 C8orf76Q96K31 380 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
SMG6-214ENST00000573827 TTC12Q9H892 705 aaPredicted RBP19.49■□□□□ 0.71
SMG6-214ENST00000573827 MINDY3Q9H8M7 445 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 CD320Q9NPF0 282 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 CHST12Q9NRB3 414 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
SMG6-214ENST00000573827 PCDHGC5Q9Y5F6 944 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 COL4A3BPQ9Y5P4 624 aa19.49■□□□□ 0.71
SMG6-214ENST00000573827 H3BQ06 376 aaPredicted RBP19.48■□□□□ 0.71
SMG6-214ENST00000573827 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 ZSCAN20P17040 1043 aaPredicted RBP19.48■□□□□ 0.71
SMG6-214ENST00000573827 DLX2Q07687 328 aaPredicted RBP19.48■□□□□ 0.71
SMG6-214ENST00000573827 EMC2Q15006 297 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 ADGRD2Q7Z7M1 963 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 COLGALT1Q8NBJ5 622 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 IL27Q8NEV9 243 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 SLC7A3Q8WY07 619 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
SMG6-214ENST00000573827 FOXP1Q9H334 677 aaPredicted RBP19.48■□□□□ 0.71
SMG6-214ENST00000573827 GRXCR2A6NFK2 248 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 POTEMA6NI47 508 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 MARCH6O60337 910 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 EOMESO95936 686 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 HOXA11P31270 313 aaPredicted RBP19.47■□□□□ 0.71
SMG6-214ENST00000573827 TXKP42681 527 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 PHKA2P46019 1235 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 LAMTOR4Q0VGL1 99 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 TPH2Q8IWU9 490 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 NLRP4Q96MN2 994 aa19.47■□□□□ 0.71
SMG6-214ENST00000573827 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 FSCN2O14926 492 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 LINC01565O15544 149 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 HOXA2O43364 376 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 ZNF623O75123 536 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 TBX10O75333 385 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 FGF18O76093 207 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 CD2BP2O95400 341 aaKnown RBP19.46■□□□□ 0.71
SMG6-214ENST00000573827 IL9P15248 144 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 SFPQP23246 707 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMG6-214ENST00000573827 POLGP54098 1239 aaPredicted RBP19.46■□□□□ 0.71
SMG6-214ENST00000573827 HMGN5P82970 282 aaKnown RBP19.46■□□□□ 0.71
SMG6-214ENST00000573827 UBE3AQ05086 875 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 XKR9Q5GH70 373 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 OTUD6AQ7L8S5 288 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 EXOC8Q8IYI6 725 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 C4orf32Q8N8J7 132 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 PSPC1Q8WXF1 523 aaKnown RBP19.46■□□□□ 0.71
SMG6-214ENST00000573827 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMG6-214ENST00000573827 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
SMG6-214ENST00000573827 ANKEF1Q9NU02 776 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 AGPAT5Q9NUQ2 364 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 DACT1Q9NYF0 836 aa19.46■□□□□ 0.71
SMG6-214ENST00000573827 NCK2O43639 380 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 GAS2O43903 313 aaKnown RBP19.45■□□□□ 0.7
SMG6-214ENST00000573827 CSPG5O95196 566 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 MCM7P33993 719 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 RARRES1P49788 294 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 ERVFC1P60507 584 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 ADAM15Q13444 863 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 RABEP1Q15276 862 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 SAFBQ15424 915 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMG6-214ENST00000573827 UBXN11Q5T124 520 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 PTCRAQ6ISU1 281 aaPredicted RBP19.45■□□□□ 0.7
SMG6-214ENST00000573827 FAM178BQ8IXR5 827 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 LRRC43Q8N309 656 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 HELQQ8TDG4 1101 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 INO80BQ9C086 356 aaPredicted RBP19.45■□□□□ 0.7
SMG6-214ENST00000573827 CLDND1Q9NY35 253 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 PCDHB12Q9Y5F1 795 aa19.45■□□□□ 0.7
SMG6-214ENST00000573827 A0A087WWV3 80 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 GLP2RO95838 553 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 LAG3P18627 525 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 U2AF2P26368 475 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMG6-214ENST00000573827 ARL2P36404 184 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 PBX3P40426 434 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 TOB1P50616 345 aaPredicted RBP19.44■□□□□ 0.7
SMG6-214ENST00000573827 PLCB3Q01970 1234 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 ORC2Q13416 577 aaPredicted RBP19.44■□□□□ 0.7
SMG6-214ENST00000573827 CATSPER4Q7RTX7 472 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 SRGAP1Q7Z6B7 1085 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 IFNLR1Q8IU57 520 aaPredicted RBP19.44■□□□□ 0.7
SMG6-214ENST00000573827 NOSTRINQ8IVI9 506 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 ASAP3Q8TDY4 903 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 MSLNLQ96KJ4 702 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 AAASQ9NRG9 546 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 CLEC1BQ9P126 229 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 PIN4Q9Y237 131 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms