RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC40-208ENST00000572270 NUMBLQ9Y6R0 609 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 DOCK8Q8NF50 2099 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 A0A0U1RQF3 1178 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 BACH1O14867 736 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 LRP3O75074 770 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 GPR32O75388 356 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 SSBP05455 408 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 CNPP09543 421 aaKnown RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 LAMP2P13473 410 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 PMLP29590 882 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 SHC2P98077 582 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 PRKCQQ04759 706 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 SNW1Q13573 536 aaKnown RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 HTR4Q13639 388 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 MLF2Q15773 248 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 ZNF484Q5JVG2 852 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 FAM160B1Q5W0V3 765 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 LAIR1Q6GTX8 287 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 TICAM2Q86XR7 235 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 METTL13Q8N6R0 699 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 SMG7Q92540 1137 aaKnown RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 FAM126AQ9BYI3 521 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 OSBPL6Q9BZF3 934 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 MRPL17Q9NRX2 175 aaKnown RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-208ENST00000572270 MYH15Q9Y2K3 1946 aa14.88□□□□□ -0.03
CCDC40-208ENST00000572270 FAM170BA6NMN3 283 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 ANHXE9PGG2 379 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 PROS1P07225 676 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 RNASELQ05823 741 aaKnown RBP14.87□□□□□ -0.03
CCDC40-208ENST00000572270 WTAPQ15007 396 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 LPAL2Q16609 132 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 IMMTQ16891 758 aaKnown RBP14.87□□□□□ -0.03
CCDC40-208ENST00000572270 IL31Q6EBC2 164 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 NELL1Q92832 810 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 PHKBQ93100 1093 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 DACT1Q9NYF0 836 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 AKT3Q9Y243 479 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 NFASCO94856 1347 aa14.87□□□□□ -0.03
CCDC40-208ENST00000572270 ANKRD11Q6UB99 2663 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-208ENST00000572270 SPDYE3A6NKU9 549 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 NCAM2O15394 837 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 GLUD1P00367 558 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 ADH1AP07327 375 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 GALTP07902 379 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 SEC23AQ15436 765 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 ZBTB41Q5SVQ8 909 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 TSSK4Q6SA08 328 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 PRR23CQ6ZRP0 262 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 ZNF598Q86UK7 904 aaKnown RBP14.86□□□□□ -0.03
CCDC40-208ENST00000572270 BCL7CQ8WUZ0 217 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-208ENST00000572270 MAP7D2Q96T17 732 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 DDX23Q9BUQ8 820 aaKnown RBP14.86□□□□□ -0.03
CCDC40-208ENST00000572270 GBP3Q9H0R5 595 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 SEC63Q9UGP8 760 aaKnown RBP14.86□□□□□ -0.03
CCDC40-208ENST00000572270 FRYQ5TBA9 3013 aa14.86□□□□□ -0.03
CCDC40-208ENST00000572270 C22orf31O95567 290 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 URODP06132 367 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 RETP07949 1114 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 EIF4BP23588 611 aaKnown RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 NRLP54845 237 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 NLRP11P59045 1033 aaKnown RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 GPC5P78333 572 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 RSPO2Q6UXX9 243 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 CKAP2LQ8IYA6 745 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 SCLT1Q96NL6 688 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 MYL10Q9BUA6 226 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 LTB4R2Q9NPC1 389 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 PRMT8Q9NR22 394 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 KCNH7Q9NS40 1196 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 SEMA4GQ9NTN9 838 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 SSX2IPQ9Y2D8 614 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 INPP5FQ9Y2H2 1132 aa14.85□□□□□ -0.03
CCDC40-208ENST00000572270 MTF2Q9Y483 593 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 ZFP37Q9Y6Q3 630 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-208ENST00000572270 SOBPA7XYQ1 873 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 C2CD2LO14523 706 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 FOXD2O60548 495 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-208ENST00000572270 RFPL2O75678 378 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 AK2P54819 239 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 PFKPQ01813 784 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 PPP2R5DQ14738 602 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 SLC44A4Q53GD3 710 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 N4BP2L1Q5TBK1 243 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-208ENST00000572270 GLB1LQ6UWU2 654 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 PRR23BQ6ZRT6 265 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 ZNF710Q8N1W2 664 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 CELF5Q8N6W0 485 aaKnown RBP14.84□□□□□ -0.03
CCDC40-208ENST00000572270 ST13P5Q8NFI4 369 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-208ENST00000572270 VN1R3Q9BXE9 311 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 PSTPIP2Q9H939 334 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 ZNF302Q9NR11 478 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 TBC1D13Q9NVG8 400 aa14.84□□□□□ -0.03
CCDC40-208ENST00000572270 ZMIZ1Q9ULJ6 1067 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms