RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 HCSTQ9UBK5 93 aa17.49■□□□□ 0.39
TSR1-202ENST00000571806 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
TSR1-202ENST00000571806 MUC6Q6W4X9 2439 aa17.49■□□□□ 0.39
TSR1-202ENST00000571806 EDIL3O43854 480 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.39
TSR1-202ENST00000571806 MRE11P49959 708 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 ITIH3Q06033 890 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 GIT2Q14161 759 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 UGCGQ16739 394 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 ZNF598Q86UK7 904 aaKnown RBP17.48■□□□□ 0.39
TSR1-202ENST00000571806 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 SLC39A11Q8N1S5 342 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 MRPL43Q8N983 215 aaKnown RBP17.48■□□□□ 0.39
TSR1-202ENST00000571806 DAGLBQ8NCG7 672 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 RNF169Q8NCN4 708 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
TSR1-202ENST00000571806 NECTIN4Q96NY8 510 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 ZSWIM6Q9HCJ5 1215 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 STK39Q9UEW8 545 aa17.48■□□□□ 0.39
TSR1-202ENST00000571806 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
TSR1-202ENST00000571806 IGKV6-21A0A0C4DH24 114 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 CLLU1OSQ5K130 101 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 CES5AQ6NT32 575 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 B3GNT9Q6UX72 402 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 MBOAT7Q96N66 472 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
TSR1-202ENST00000571806 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
TSR1-202ENST00000571806 MAFO75444 373 aaPredicted RBP17.46■□□□□ 0.39
TSR1-202ENST00000571806 PHKA2P46019 1235 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 RAB27AP51159 221 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 PTPN5P54829 565 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
TSR1-202ENST00000571806 MTERF2Q49AM1 385 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 SYCE2Q6PIF2 218 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 FBXL6Q8N531 539 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 HELQQ8TDG4 1101 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 TMEM169Q96HH4 297 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 PPME1Q9Y570 386 aa17.46■□□□□ 0.39
TSR1-202ENST00000571806 C2orf71A6NGG8 1288 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 M0R2N6 131 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 ZNF623O75123 536 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 POLGP54098 1239 aaPredicted RBP17.45■□□□□ 0.38
TSR1-202ENST00000571806 BCAR1P56945 870 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 PSMC5P62195 406 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 TOB2Q14106 344 aaPredicted RBP17.45■□□□□ 0.38
TSR1-202ENST00000571806 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSR1-202ENST00000571806 PTPN21Q16825 1174 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
TSR1-202ENST00000571806 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 TMEM87AQ8NBN3 555 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 FAM20AQ96MK3 541 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 IRF2BPLQ9H1B7 796 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 ADAM7Q9H2U9 754 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 SUCLA2Q9P2R7 463 aaPredicted RBP17.45■□□□□ 0.38
TSR1-202ENST00000571806 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
TSR1-202ENST00000571806 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 IRAK3Q9Y616 596 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 TRIOO75962 3097 aa17.45■□□□□ 0.38
TSR1-202ENST00000571806 A0A087WZ62 844 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 STBD1O95210 358 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 XBP1P17861 261 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 FGFR4P22455 802 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 PBX3P40426 434 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 NUBP1P53384 320 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
TSR1-202ENST00000571806 RIPOR3Q96MK2 946 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 NAP1L4Q99733 375 aaKnown RBP17.44■□□□□ 0.38
TSR1-202ENST00000571806 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
TSR1-202ENST00000571806 DZANK1Q9NVP4 752 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 TECTAO75443 2155 aa17.44■□□□□ 0.38
TSR1-202ENST00000571806 WDFY4Q6ZS81 3184 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 CDKL5O76039 1030 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 TDP2O95551 362 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 CXCL14O95715 111 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 GCFC2P16383 781 aaKnown RBP17.43■□□□□ 0.38
TSR1-202ENST00000571806 MTHFRP42898 656 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
TSR1-202ENST00000571806 PPP2R5CQ13362 524 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 DRP2Q13474 957 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 ZBTB33Q86T24 672 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 DDX53Q86TM3 631 aaKnown RBP17.43■□□□□ 0.38
TSR1-202ENST00000571806 SLC7A3Q8WY07 619 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 GJA10Q969M2 543 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 PIN4Q9Y237 131 aaKnown RBP17.43■□□□□ 0.38
TSR1-202ENST00000571806 ZNF318Q5VUA4 2279 aa17.43■□□□□ 0.38
TSR1-202ENST00000571806 TBX3O15119 743 aa17.42■□□□□ 0.38
TSR1-202ENST00000571806 CLASP2O75122 1294 aaKnown RBP17.42■□□□□ 0.38
TSR1-202ENST00000571806 ZC3H11AO75152 810 aaKnown RBP eCLIP17.42■□□□□ 0.38
TSR1-202ENST00000571806 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms