RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 BCAR1P56945 870 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 DUSP8Q13202 625 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 EPHA7Q15375 998 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 PIK3R6Q5UE93 754 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 SLFN12LQ6IEE8 588 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 HOMER1Q86YM7 354 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 SHCBP1Q8NEM2 672 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 OR5AN1Q8NGI8 311 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 CFHR4Q92496 578 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 RABGGTAQ92696 567 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 SLC7A6OSQ96CW6 309 aaPredicted RBP4.95□□□□□ -1.62
CDC27-213ENST00000571643 MPHOSPH9Q99550 1183 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 ORAI3Q9BRQ5 295 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 ZNF747Q9BV97 191 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 KCMF1Q9P0J7 381 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 B4GALT6Q9UBX8 382 aa4.95□□□□□ -1.62
CDC27-213ENST00000571643 ARAP3Q8WWN8 1544 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 CBX4O00257 560 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 MATN2O00339 956 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 AKAP8O43823 692 aaKnown RBP4.94□□□□□ -1.62
CDC27-213ENST00000571643 ASMTLO95671 621 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 ACO1P21399 889 aaKnown RBP4.94□□□□□ -1.62
CDC27-213ENST00000571643 SLC6A3Q01959 620 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 HGFACQ04756 655 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 TBR1Q16650 682 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 MAMDC4Q6UXC1 1216 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 RNF207Q6ZRF8 634 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 BMP8AQ7Z5Y6 402 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 KIF18BQ86Y91 864 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 OR14K1Q8NGZ2 314 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 CLUHP3Q96NS8 147 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 ZKSCAN5Q9Y2L8 839 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 CTDP1Q9Y5B0 961 aaPredicted RBP4.94□□□□□ -1.62
CDC27-213ENST00000571643 CD109Q6YHK3 1445 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 NEO1Q92859 1461 aa4.94□□□□□ -1.62
CDC27-213ENST00000571643 GAS7O60861 476 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 JMJD7P0C870 316 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 ACRV1P26436 265 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 MSX2P35548 267 aaPredicted RBP4.93□□□□□ -1.62
CDC27-213ENST00000571643 PABPC4Q13310 644 aaKnown RBP eCLIP4.93□□□□□ -1.62
CDC27-213ENST00000571643 ZNF460Q14592 562 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 GRM7Q14831 915 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 CFAP100Q494V2 611 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 NRN1LQ496H8 165 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 GAGE13Q4V321 117 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 CEP162Q5TB80 1403 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 PRAMEF9Q5VWM5 478 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 CDCA2Q69YH5 1023 aaPredicted RBP4.93□□□□□ -1.62
CDC27-213ENST00000571643 TIGD7Q6NT04 549 aaPredicted RBP4.93□□□□□ -1.62
CDC27-213ENST00000571643 PHYKPLQ8IUZ5 450 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 PASD1Q8IV76 773 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 C7orf31Q8N865 590 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 APPBP2Q92624 585 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
CDC27-213ENST00000571643 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 POLR3BQ9NW08 1133 aaPredicted RBP4.93□□□□□ -1.62
CDC27-213ENST00000571643 PLA2G3Q9NZ20 509 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 DENND2AQ9ULE3 1009 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 SYNPO2Q9UMS6 1093 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 SPO11Q9Y5K1 396 aa4.93□□□□□ -1.62
CDC27-213ENST00000571643 PPRC1Q5VV67 1664 aaKnown RBP4.92□□□□□ -1.62
CDC27-213ENST00000571643 MAP3K1Q13233 1512 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 CFAP74Q9C0B2 1584 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 TROQ12816 1431 aaPredicted RBP4.92□□□□□ -1.62
CDC27-213ENST00000571643 A0A1W2PRX2 142 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 TRAF5O00463 557 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 FSHBP01225 129 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 RIN1Q13671 783 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 NOLC1Q14978 699 aaKnown RBP eCLIP4.92□□□□□ -1.62
CDC27-213ENST00000571643 USP39Q53GS9 565 aaKnown RBP4.92□□□□□ -1.62
CDC27-213ENST00000571643 MIIPQ5JXC2 388 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 ANKRD35Q8N283 1001 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 SLC16A11Q8NCK7 471 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 C16orf92Q96LL3 132 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 TUBGCP5Q96RT8 1024 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 USP35Q9P2H5 1018 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 GIT1Q9Y2X7 761 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 KDM6BO15054 1643 aa4.92□□□□□ -1.62
CDC27-213ENST00000571643 DVL2O14641 736 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 AMHP03971 560 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 ACVRL1P37023 503 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 RGS3P49796 1198 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 OCRLQ01968 901 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 ADAM15Q13444 863 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 FOXE3Q13461 319 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 C16orf86Q6ZW13 317 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 BCL6BQ8N143 479 aaPredicted RBP4.91□□□□□ -1.62
CDC27-213ENST00000571643 PPM1KQ8N3J5 372 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 D2HGDHQ8N465 521 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 ZNF341Q9BYN7 854 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 TLR9Q9NR96 1032 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 USP36Q9P275 1121 aaKnown RBP4.91□□□□□ -1.62
CDC27-213ENST00000571643 PLAAQ9Y263 795 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 TSPOAP1O95153 1857 aa4.91□□□□□ -1.62
CDC27-213ENST00000571643 KIF14Q15058 1648 aa4.9□□□□□ -1.62
CDC27-213ENST00000571643 PLCH2O75038 1416 aa4.9□□□□□ -1.62
CDC27-213ENST00000571643 CAPN14A8MX76 684 aa4.9□□□□□ -1.63
CDC27-213ENST00000571643 PPP1R12AO14974 1030 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms