RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 TMEM117Q9H0C3 514 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 TMEM60Q9H2L4 133 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 FOXP1Q9H334 677 aaPredicted RBP33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 TYW1Q9NV66 732 aaKnown RBP33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 DACT1Q9NYF0 836 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 HOXA2O43364 376 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 CAMK1Q14012 370 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 NEK9Q8TD19 979 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 HSD17B14Q9BPX1 270 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 CHST12Q9NRB3 414 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 AAASQ9NRG9 546 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 RNF19AQ9NV58 838 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 PCDHB12Q9Y5F1 795 aa33.89■■■■□ 3.02
CTDNEP1-206ENST00000571409 A0A0U1RQF3 1178 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 DNAJB1P25685 340 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 EMC2Q15006 297 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 POF1BQ8WVV4 589 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 PRPF31Q8WWY3 499 aaKnown RBP33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 PSPC1Q8WXF1 523 aaKnown RBP33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 PABPC5Q96DU9 382 aaKnown RBP33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 CASD1Q96PB1 797 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 PLXNA4Q9HCM2 1894 aa33.88■■■■□ 3.01
CTDNEP1-206ENST00000571409 POTEMA6NI47 508 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 GAS2O43903 313 aaKnown RBP33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 LYPLA2O95372 231 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 GNL2Q13823 731 aaKnown RBP33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 LEXMQ3ZCV2 418 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 EP400NLQ6ZTU2 488 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 ABI1Q8IZP0 508 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 CWH43Q9H720 699 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 IFT122Q9HBG6 1241 aa33.87■■■■□ 3.01
CTDNEP1-206ENST00000571409 TTC28Q96AY4 2481 aa33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 CATSPER4Q7RTX7 472 aa33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 COLGALT1Q8NBJ5 622 aa33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 TCP11Q8WWU5 503 aa33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 MTRQ99707 1265 aa33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 UPF2Q9HAU5 1272 aaKnown RBP33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 PIN4Q9Y237 131 aaKnown RBP33.86■■■■□ 3.01
CTDNEP1-206ENST00000571409 BRWD1Q9NSI6 2320 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 ST18O60284 1047 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 EOMESO95936 686 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 LAMTOR4Q0VGL1 99 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 HYAL1Q12794 435 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 COL19A1Q14993 1142 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 ZNF598Q86UK7 904 aaKnown RBP33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 GADD45GIP1Q8TAE8 222 aaPredicted RBP33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 CLDND1Q9NY35 253 aa33.85■■■■□ 3.01
CTDNEP1-206ENST00000571409 SRGAP2CP0DJJ0 459 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 ATF7P17544 494 aaPredicted RBP33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 LAG3P18627 525 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 ZNF174Q15697 407 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 CLLU1OSQ5K130 101 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 TWF2Q6IBS0 349 aaKnown RBP33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 LRRC55Q6ZSA7 311 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 NOSTRINQ8IVI9 506 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 ANKEF1Q9NU02 776 aa33.84■■■■□ 3.01
CTDNEP1-206ENST00000571409 H3BQ06 376 aaPredicted RBP33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 NCK2O43639 380 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 IRS1P35568 1242 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 ORC2Q13416 577 aaPredicted RBP33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 FERMT3Q86UX7 667 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 THNSL1Q8IYQ7 743 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 LRRC43Q8N309 656 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 HELQQ8TDG4 1101 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 XPNPEP1Q9NQW7 623 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 MYO7AQ13402 2215 aa33.83■■■■□ 3.01
CTDNEP1-206ENST00000571409 FGF18O76093 207 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 PHKA2P46019 1235 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 CSPP1Q1MSJ5 1256 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 TTC38Q5R3I4 469 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 SRGAP1Q7Z6B7 1085 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 CCDC43Q96MW1 224 aaKnown RBP33.82■■■■□ 3
CTDNEP1-206ENST00000571409 TRAIPQ9BWF2 469 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 IGFLR1Q9H665 355 aa33.82■■■■□ 3
CTDNEP1-206ENST00000571409 ASAP2O43150 1006 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 OR52Z1P0C646 297 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 GTF2F1P35269 517 aaKnown RBP eCLIP33.81■■■■□ 37e-25■□□□□ 11
CTDNEP1-206ENST00000571409 UBE3AQ05086 875 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 RNF149Q8NC42 400 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 PIGOQ8TEQ8 1089 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 PPP2R3CQ969Q6 453 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 MINDY3Q9H8M7 445 aa33.81■■■■□ 3
CTDNEP1-206ENST00000571409 SKIP12755 728 aa33.8■■■■□ 3
CTDNEP1-206ENST00000571409 TECP42680 631 aa33.8■■■■□ 3
CTDNEP1-206ENST00000571409 PTCRAQ6ISU1 281 aaPredicted RBP33.8■■■■□ 3
CTDNEP1-206ENST00000571409 AGPAT5Q9NUQ2 364 aa33.8■■■■□ 3
CTDNEP1-206ENST00000571409 NOL7Q9UMY1 257 aaKnown RBP33.8■■■■□ 3
CTDNEP1-206ENST00000571409 MUC3AQ02505 3323 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 DGAT1O75907 488 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 TRAPPC10P48553 1259 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 RARRES1P49788 294 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 CTC1Q2NKJ3 1217 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 ADGRD2Q7Z7M1 963 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 FAM105AQ9NUU6 356 aa33.79■■■■□ 3
CTDNEP1-206ENST00000571409 A0A087WWV3 80 aa33.78■■■■□ 3
CTDNEP1-206ENST00000571409 SPATA31C1P0DKV0 1188 aa33.78■■■■□ 3
CTDNEP1-206ENST00000571409 LTBRP36941 435 aa33.78■■■■□ 3
CTDNEP1-206ENST00000571409 MXD4Q14582 209 aaPredicted RBP33.78■■■■□ 3
CTDNEP1-206ENST00000571409 LONRF3Q496Y0 759 aa33.78■■■■□ 3
CTDNEP1-206ENST00000571409 KCNT2Q6UVM3 1135 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms