RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SH2D3AQ9BRG2 576 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 REEP2Q9BRK0 252 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 C16orf70Q9BSU1 422 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 TSEN34Q9BSV6 310 aaKnown RBP7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 POLR3FQ9H1D9 316 aaPredicted RBP7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 PARVGQ9HBI0 331 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 STARD7Q9NQZ5 370 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 PANK4Q9NVE7 773 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 LARSQ9P2J5 1176 aaKnown RBP7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 COL4A3BPQ9Y5P4 624 aa7.29□□□□□ -1.24
CTDNEP1-204ENST00000570484 A0A0U1RQG5 324 aaPredicted RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 PVALEFA0A1B0GWK0 134 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 A0A1W2PQ45 241 aaPredicted RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 A0A1W2PQY0 241 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 MYMKA6NI61 221 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 H0YCG3 227 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 K7ENM7 598 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 M0QZ92 97 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 BIN1O00499 593 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 ZBTB39O15060 712 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 MAGEB2O15479 319 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 KIF20AO95235 890 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 TFRCP02786 760 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 INSRRP14616 1297 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 CASP1P29466 404 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 ACLYP53396 1101 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 NKX3-2P78367 333 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 DPYDQ12882 1025 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 COASYQ13057 564 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 TFDP1Q14186 410 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 PPP2R5AQ15172 486 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 KCNA10Q16322 511 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 HERC4Q5GLZ8 1057 aaPredicted RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 FAM26FQ5R3K3 315 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 ODR4Q5SWX8 454 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 PPP2R2DQ66LE6 453 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 RINT1Q6NUQ1 792 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 SH3RF1Q7Z6J0 888 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 RSPH3Q86UC2 560 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 SFR1Q86XK3 245 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 MYCT1Q8N699 235 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 TRIML1Q8N9V2 468 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 SLC17A8Q8NDX2 589 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 LMBR1Q8WVP7 490 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 PSPC1Q8WXF1 523 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 ERCC4Q92889 916 aaPredicted RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 C7orf25Q9BPX7 421 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 MCOLN1Q9GZU1 580 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 NAT10Q9H0A0 1025 aaKnown RBP7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 RNPEPQ9H4A4 650 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 SUGCTQ9HAC7 445 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 ANO10Q9NW15 660 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 SEL1LQ9UBV2 794 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 LIMD1Q9UGP4 676 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 AKT3Q9Y243 479 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 PCDHA5Q9Y5H7 936 aa7.28□□□□□ -1.24
CTDNEP1-204ENST00000570484 KIAA1217Q5T5P2 1943 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 LRRIQ4A6NIV6 560 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 CCDC169A6NNP5 214 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAFO75444 373 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 C22orf31O95567 290 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 RPLP2P05387 115 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 GJB1P08034 283 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 CYP2C9P11712 490 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PLS3P13797 630 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 CAPN2P17655 700 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 NDUFV2P19404 249 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 ATP4AP20648 1035 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 ABCD1P33897 745 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PPP1R2P41236 205 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 CLCN3P51790 818 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 SMTNP53814 917 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 ALCAMQ13740 583 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 GIT2Q14161 759 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MXD4Q14582 209 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 KCNB1Q14721 858 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 NBPF20Q3BBV1 942 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRPF38BQ5VTL8 546 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 TAF2Q6P1X5 1199 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 NFRKBQ6P4R8 1299 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MTHFD1LQ6UB35 978 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 C1orf186Q6ZWK4 172 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZBTB8OSQ8IWT0 167 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 FAM178BQ8IXR5 827 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 LRRC71Q8N4P6 559 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 CCDC155Q8N6L0 562 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 KLHDC9Q8NEP7 349 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 DEPTORQ8TB45 409 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 LRRC15Q8TF66 581 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 KAT2BQ92831 832 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 TMEM143Q96AN5 459 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 SEZ6LQ9BYH1 1024 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 FAM49AQ9H0Q0 323 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 DHX33Q9H6R0 707 aaKnown RBP7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MRPL44Q9H9J2 332 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms