RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 DKC1O60832 514 aaKnown RBP eCLIP23.58■■□□□ 1.374e-8■■□□□ 11.8
RPA1-202ENST00000570451 SFPQP23246 707 aaKnown RBP eCLIP23.58■■□□□ 1.37
RPA1-202ENST00000570451 PBX3P40426 434 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 NPEPPSP55786 919 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 NR5A1Q13285 461 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 SMAD4Q13485 552 aaKnown RBP23.58■■□□□ 1.37
RPA1-202ENST00000570451 EARS2Q5JPH6 523 aaKnown RBP23.58■■□□□ 1.37
RPA1-202ENST00000570451 LRRC55Q6ZSA7 311 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 KSR1Q8IVT5 923 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 HELQQ8TDG4 1101 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 HAS1Q92839 578 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 GTF3C6Q969F1 213 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 JPH2Q9BR39 696 aaPredicted RBP23.58■■□□□ 1.37
RPA1-202ENST00000570451 CYP26B1Q9NR63 512 aa23.58■■□□□ 1.37
RPA1-202ENST00000570451 PER2O15055 1255 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 P4HBP07237 508 aaKnown RBP23.57■■□□□ 1.36
RPA1-202ENST00000570451 FDPSP14324 419 aaKnown RBP23.57■■□□□ 1.36
RPA1-202ENST00000570451 NEK4P51957 841 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 ERVFC1P60507 584 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 SMAD2Q15796 467 aaKnown RBP23.57■■□□□ 1.36
RPA1-202ENST00000570451 CLLU1OSQ5K130 101 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 ZNF410Q86VK4 478 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 ADHFE1Q8IWW8 467 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 SLC7A3Q8WY07 619 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 CEP170P1Q96L14 293 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 ZNF558Q96NG5 402 aa23.57■■□□□ 1.36
RPA1-202ENST00000570451 PIN4Q9Y237 131 aaKnown RBP23.57■■□□□ 1.36
RPA1-202ENST00000570451 A0A0U1RQF3 1178 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 TBX3O15119 743 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 BAG4O95429 457 aaKnown RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 POLGP54098 1239 aaPredicted RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 PLPP4Q5VZY2 271 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 TWF2Q6IBS0 349 aaKnown RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 KCNT2Q6UVM3 1135 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 ZNF579Q8NAF0 562 aaKnown RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 LXNQ9BS40 222 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 INO80BQ9C086 356 aaPredicted RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 ENTPD7Q9NQZ7 604 aa23.56■■□□□ 1.36
RPA1-202ENST00000570451 BMP2KQ9NSY1 1161 aaPredicted RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 WRAP73Q9P2S5 460 aaPredicted RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 PUF60Q9UHX1 559 aaKnown RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 BARX2Q9UMQ3 279 aaPredicted RBP23.56■■□□□ 1.36
RPA1-202ENST00000570451 EOMESO95936 686 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 EPHA7Q15375 998 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 LONRF3Q496Y0 759 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 CATSPER4Q7RTX7 472 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 SLFN12Q8IYM2 578 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 MRPS27Q92552 414 aaKnown RBP23.55■■□□□ 1.36
RPA1-202ENST00000570451 MSLNLQ96KJ4 702 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 C11orf16Q9NQ32 467 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 CHST12Q9NRB3 414 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 RGL1Q9NZL6 768 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 CLEC1BQ9P126 229 aa23.55■■□□□ 1.36
RPA1-202ENST00000570451 JAK2O60674 1132 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 EIF5BO60841 1220 aaKnown RBP23.54■■□□□ 1.36
RPA1-202ENST00000570451 GPR37L1O60883 481 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 GLP2RO95838 553 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 ALADP13716 330 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 ATF7P17544 494 aaPredicted RBP23.54■■□□□ 1.36
RPA1-202ENST00000570451 PPM1AP35813 382 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 CYP4A11Q02928 519 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 KRT17Q04695 432 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 TRIM29Q14134 588 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 ZNF598Q86UK7 904 aaKnown RBP23.54■■□□□ 1.36
RPA1-202ENST00000570451 NSUN7Q8NE18 718 aaKnown RBP23.54■■□□□ 1.36
RPA1-202ENST00000570451 TMEM143Q96AN5 459 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 DYDC2Q96IM9 177 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 POP1Q99575 1024 aaKnown RBP23.54■■□□□ 1.36
RPA1-202ENST00000570451 TCF25Q9BQ70 676 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 LZTS1Q9Y250 596 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 COL4A3BPQ9Y5P4 624 aa23.54■■□□□ 1.36
RPA1-202ENST00000570451 YWHABP31946 246 aaKnown RBP23.53■■□□□ 1.36
RPA1-202ENST00000570451 PHKA2P46019 1235 aa23.53■■□□□ 1.36
RPA1-202ENST00000570451 RBM10P98175 930 aaKnown RBP23.53■■□□□ 1.36
RPA1-202ENST00000570451 PLCB3Q01970 1234 aa23.53■■□□□ 1.36
RPA1-202ENST00000570451 CTTNQ14247 550 aaKnown RBP23.53■■□□□ 1.36
RPA1-202ENST00000570451 PDE12Q6L8Q7 609 aaKnown RBP23.53■■□□□ 1.36
RPA1-202ENST00000570451 LPPQ93052 612 aa23.53■■□□□ 1.36
RPA1-202ENST00000570451 MRPL9Q9BYD2 267 aaKnown RBP23.53■■□□□ 1.36
RPA1-202ENST00000570451 SPG21Q9NZD8 308 aa23.53■■□□□ 1.36
RPA1-202ENST00000570451 TRIOO75962 3097 aa23.53■■□□□ 1.36
RPA1-202ENST00000570451 C19orf67A6NJJ6 358 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 FSCN2O14926 492 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 DCXO43602 365 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 SRGAP2CP0DJJ0 459 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 RFC5P40937 340 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 DUSP6Q16828 381 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 XKR9Q5GH70 373 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 OTUD6AQ7L8S5 288 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 TPH2Q8IWU9 490 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 C4orf19Q8IY42 314 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 EXOC8Q8IYI6 725 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 SMRP1Q8NCR6 262 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 PRPF31Q8WWY3 499 aaKnown RBP23.52■■□□□ 1.36
RPA1-202ENST00000570451 PSPC1Q8WXF1 523 aaKnown RBP23.52■■□□□ 1.36
RPA1-202ENST00000570451 TNFRSF25Q93038 417 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 CDCA3Q99618 268 aaPredicted RBP23.52■■□□□ 1.36
RPA1-202ENST00000570451 ZSWIM4Q9H7M6 989 aa23.52■■□□□ 1.36
RPA1-202ENST00000570451 BTBD18B2RXH4 712 aa23.51■■□□□ 1.35
RPA1-202ENST00000570451 SEC24BO95487 1268 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms