RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-212ENST00000570129 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
GTF3C1-212ENST00000570129 COL4A3BPQ9Y5P4 624 aa10.93□□□□□ -0.66
GTF3C1-212ENST00000570129 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 MYO9BQ13459 2157 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 M0QZ92 97 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 PARNO95453 639 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 AMHP03971 560 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 ATF7P17544 494 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 CYP11B2P19099 503 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 PDCP20941 246 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 TMOD1P28289 359 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 PRPHP41219 470 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 FAM189BP81408 668 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 HTRA4P83105 476 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 MAPK7Q13164 816 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 ORC2Q13416 577 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 AMHR2Q16671 573 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 UBXN11Q5T124 520 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 CABP7Q86V35 215 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 RAD9AQ99638 391 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 MTRQ99707 1265 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 RNF39Q9H2S5 420 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 SLC28A3Q9HAS3 691 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 RGS18Q9NS28 235 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 BLOC1S4Q9NUP1 217 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 DBR1Q9UK59 544 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 REV3LO60673 3130 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 LOXHD1Q8IVV2 1947 aa10.92□□□□□ -0.66
GTF3C1-212ENST00000570129 GBF1Q92538 1859 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 ADGRA3Q8IWK6 1321 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 B4GALT3O60512 393 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 LPXNO60711 386 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 CSPG5O95196 566 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 F13A1P00488 732 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 SSBP05455 408 aaKnown RBP eCLIP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 HSP90AA1P07900 732 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 LIG1P18858 919 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 RFC5P40937 340 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 DNM2P50570 870 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 DNM1Q05193 864 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 MCM6Q14566 821 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 RAB30Q15771 203 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 CCDC85BQ15834 202 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 LRRC55Q6ZSA7 311 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 NEK9Q8TD19 979 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 PSPC1Q8WXF1 523 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 PPM1EQ8WY54 764 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 ZNF689Q96CS4 500 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 EIF2AQ9BY44 585 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 GCOM2Q9BZD3 368 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 IKZF4Q9H2S9 585 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 RC3H2Q9HBD1 1191 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 TRANK1O15050 2925 aa10.91□□□□□ -0.66
GTF3C1-212ENST00000570129 PRUNE2Q8WUY3 3088 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 DENND3A2RUS2 1198 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 GPR182O15218 404 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 DKC1O60832 514 aaKnown RBP eCLIP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 DGKIO75912 1065 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 EYA4O95677 639 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 PLA2G4BP0C869 781 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 XRCC6P12956 609 aaKnown RBP eCLIP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 PLCG1P19174 1290 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 PBX3P40426 434 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SLC12A3P55017 1021 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 PTENP60484 403 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SLC39A14Q15043 492 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 KRT79Q5XKE5 535 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 C1orf186Q6ZWK4 172 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 TAS1R3Q7RTX0 852 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 CATSPER4Q7RTX7 472 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 ECHDC2Q86YB7 292 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 TMEM130Q8N3G9 435 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 LINC00301Q8NCQ3 95 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SYMPKQ92797 1274 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 APBB2Q92870 758 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 YME1L1Q96TA2 773 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 HES2Q9Y543 173 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SRPRBQ9Y5M8 271 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 MRPL42Q9Y6G3 142 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
GTF3C1-212ENST00000570129 LRRIQ4A6NIV6 560 aa10.89□□□□□ -0.67
GTF3C1-212ENST00000570129 LAD1O00515 517 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms