RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 TXNRD2Q9NNW7 524 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 DDX4Q9NQI0 724 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 WHRNQ9P202 907 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 LRP2BPQ9P2M1 347 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 HERC5Q9UII4 1024 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 PTPRFP10586 1907 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 GPR75-ASB3A0A0A6YYF3 556 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 A0A1W2PQU0 124 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 SLC15A5A6NIM6 579 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 PRR33A8MZF0 331 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 KBTBD13C9JR72 458 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 GDF11O95390 407 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 F13BP05160 661 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 ASNSP08243 561 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 FAM153BP0C7A2 387 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 ITGA4P13612 1032 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 BTDP43251 543 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 KIR3DL1P43629 444 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 ZNF445P59923 1031 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 CYP27A1Q02318 531 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
UBFD1-209ENST00000569919 AKNAD1Q5T1N1 836 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 WDR63Q8IWG1 891 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 ANKRD44Q8N8A2 993 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 DTWD2Q8NBA8 298 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 ADCY4Q8NFM4 1077 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 KLHDC4Q8TBB5 520 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 APPBP2Q92624 585 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 PORCNQ9H237 461 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 TMEM260Q9NX78 707 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 KCNH3Q9ULD8 1083 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 RABGAP1Q9Y3P9 1069 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 PLXNB2O15031 1838 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 PHIPQ8WWQ0 1821 aa7.29□□□□□ -1.24
UBFD1-209ENST00000569919 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 TRIM43BA6NCK2 446 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 CDC45O75419 566 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 CLSTN1O94985 981 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 ITGAVP06756 1048 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 HOXC6P09630 235 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 SNX17Q15036 470 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 ATP2B3Q16720 1220 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
UBFD1-209ENST00000569919 ATG9AQ7Z3C6 839 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 HOMER1Q86YM7 354 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 FOXP4Q8IVH2 680 aaPredicted RBP7.28□□□□□ -1.24
UBFD1-209ENST00000569919 USP38Q8NB14 1042 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 BVESQ8NE79 360 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 BRF1Q92994 677 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 TRIM43Q96BQ3 446 aaPredicted RBP7.28□□□□□ -1.24
UBFD1-209ENST00000569919 PAGR1Q9BTK6 254 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 DHX36Q9H2U1 1008 aaKnown RBP7.28□□□□□ -1.24
UBFD1-209ENST00000569919 THEGQ9P2T0 379 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 PI4KBQ9UBF8 816 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 ABCF2Q9UG63 623 aa7.28□□□□□ -1.24
UBFD1-209ENST00000569919 FANCIQ9NVI1 1328 aa7.27□□□□□ -1.24
UBFD1-209ENST00000569919 NOP56O00567 594 aaKnown RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 STRNO43815 780 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PEX10O60683 326 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 ZNF865P0CJ78 1059 aaPredicted RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PHKA1P46020 1223 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 RHBDL3P58872 404 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 GSTO1P78417 241 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 WDR78Q5VTH9 848 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 C22orf34Q6ZV56 151 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 TMC3Q7Z5M5 1100 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 TMEM151AQ8N4L1 468 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 ZSWIM2Q8NEG5 633 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PPM1EQ8WY54 764 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 UHRF1Q96T88 793 aaPredicted RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PRKRIP1Q9H875 184 aaPredicted RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PDLIM7Q9NR12 457 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 FLRT1Q9NZU1 646 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 FHOD1Q9Y613 1164 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 RFX7Q2KHR2 1363 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 MYH2Q9UKX2 1941 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 DOCK2Q92608 1830 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 MROH7-TTC4A0A0A0MT08 1334 aa7.27□□□□□ -1.25
UBFD1-209ENST00000569919 PDS5AQ29RF7 1337 aaKnown RBP7.27□□□□□ -1.25
UBFD1-209ENST00000569919 WDR64B1ANS9 1081 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 CIAO1O76071 339 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 CLTBP09497 229 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 CYBAP13498 195 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 CYP2C19P33261 490 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 RFX5P48382 616 aaPredicted RBP7.26□□□□□ -1.25
UBFD1-209ENST00000569919 PPP2R2AP63151 447 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 MECOMQ03112 1051 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 TLE2Q04725 743 aa7.26□□□□□ -1.25
UBFD1-209ENST00000569919 FPGSQ05932 587 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms