RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CCDC142Q17RM4 750 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 MFSD5Q6N075 450 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 IGSF22Q8N9C0 903 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 PLA2G15Q8NCC3 412 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 BOCQ9BWV1 1114 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 PACSIN3Q9UKS6 424 aa6.99□□□□□ -1.29
CHD9-220ENST00000569794 TCRBV16S1A1N1A0A5B0 115 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 NUDT3O95989 172 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 NR4A1P22736 598 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 IL12RB1P42701 662 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 NBPF6Q5VWK0 638 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 SYNE4Q8N205 404 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 MB21D1Q8N884 522 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 MDGA1Q8NFP4 955 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 NBPF4Q96M43 638 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 ZNF512Q96ME7 567 aaPredicted RBP6.98□□□□□ -1.29
CHD9-220ENST00000569794 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 SFMBT1Q9UHJ3 866 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 FZD1Q9UP38 647 aa6.98□□□□□ -1.29
CHD9-220ENST00000569794 MFAP3LO75121 409 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 IPO13O94829 963 aaKnown RBP6.97□□□□□ -1.29
CHD9-220ENST00000569794 JUNP05412 331 aaKnown RBP6.97□□□□□ -1.29
CHD9-220ENST00000569794 ITGB1P05556 798 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 LMO1P25800 156 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 LY6G5CQ5SRR4 150 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 NAIF1Q69YI7 327 aaPredicted RBP6.97□□□□□ -1.29
CHD9-220ENST00000569794 KRT40Q6A162 431 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 SLFN12LQ6IEE8 588 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 THAP3Q8WTV1 239 aaPredicted RBP6.97□□□□□ -1.29
CHD9-220ENST00000569794 DYDC2Q96IM9 177 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 MAML3Q96JK9 1138 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 WDR92Q96MX6 357 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 POLR3BQ9NW08 1133 aaPredicted RBP6.97□□□□□ -1.29
CHD9-220ENST00000569794 SIRPGQ9P1W8 387 aa6.97□□□□□ -1.29
CHD9-220ENST00000569794 PTPAQ15257 358 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 LRRC55Q6ZSA7 311 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 FGD2Q7Z6J4 655 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 PRIMA1Q86XR5 153 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 PROKR1Q8TCW9 393 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 HS3ST4Q9Y661 456 aa6.96□□□□□ -1.3
CHD9-220ENST00000569794 GRID2IPA4D2P6 1211 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 KCNQ2O43526 872 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 ABHD16AO95870 558 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 ARL8AQ96BM9 186 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 ZNF764Q96H86 408 aaPredicted RBP6.95□□□□□ -1.3
CHD9-220ENST00000569794 HAPLN2Q9GZV7 340 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 DNAI1Q9UI46 699 aa6.95□□□□□ -1.3
CHD9-220ENST00000569794 UBA6A0AVT1 1052 aaPredicted RBP6.94□□□□□ -1.3
CHD9-220ENST00000569794 DVL2O14641 736 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 KRT37O76014 449 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 MECP2P51608 486 aaKnown RBP6.94□□□□□ -1.3
CHD9-220ENST00000569794 KIF11P52732 1056 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 ARHGAP44Q17R89 818 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 TTC38Q5R3I4 469 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 CMTM4Q8IZR5 234 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 ST8SIA2Q92186 375 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 RIOX1Q9H6W3 641 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 WDR26Q9H7D7 661 aa6.94□□□□□ -1.3
CHD9-220ENST00000569794 C14orf93Q9H972 538 aaKnown RBP6.94□□□□□ -1.3
CHD9-220ENST00000569794 PPFIA4O75335 1185 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 HNRNPLP14866 589 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD9-220ENST00000569794 MRPS21P82921 87 aaKnown RBP6.93□□□□□ -1.3
CHD9-220ENST00000569794 SPIDRQ14159 915 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 RASA3Q14644 834 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 DCAF17Q5H9S7 520 aaPredicted RBP6.93□□□□□ -1.3
CHD9-220ENST00000569794 LRCH2Q5VUJ6 765 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 KCNV1Q6PIU1 500 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
CHD9-220ENST00000569794 MRPL4Q9BYD3 311 aaKnown RBP6.93□□□□□ -1.3
CHD9-220ENST00000569794 NCDNQ9UBB6 729 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 PPP1R1BQ9UD71 204 aaPredicted RBP6.93□□□□□ -1.3
CHD9-220ENST00000569794 ZNHIT2Q9UHR6 403 aa6.93□□□□□ -1.3
CHD9-220ENST00000569794 DAPK3O43293 454 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 KIR2DL3P43628 341 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 NPEPPSP55786 919 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 PRAMEF9Q5VWM5 478 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 ACSS2Q9NR19 701 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 PTGFRNQ9P2B2 879 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 SORCS3Q9UPU3 1222 aa6.92□□□□□ -1.3
CHD9-220ENST00000569794 FAM221BA6H8Z2 402 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 MTSS1O43312 755 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 B3GALT2O43825 422 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 STC2O76061 302 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 GNAT2P19087 354 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 ZFP36P26651 326 aaKnown RBP6.91□□□□□ -1.3
CHD9-220ENST00000569794 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 APBB1IPQ7Z5R6 666 aaPredicted RBP6.91□□□□□ -1.3
CHD9-220ENST00000569794 CXorf67Q86X51 503 aaPredicted RBP6.91□□□□□ -1.3
CHD9-220ENST00000569794 CPT1CQ8TCG5 803 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 TOR3AQ9H497 397 aa6.91□□□□□ -1.3
CHD9-220ENST00000569794 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 M0R2C6 588 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 BCAR1P56945 870 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 SERINC3Q13530 473 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 PLEKHG4Q58EX7 1191 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms