RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RPAINQ86UA6 219 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 FAM184AQ8NB25 1140 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 RDM1Q8NG50 284 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 HERVK_113Q902F9 699 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 SLC5A5Q92911 643 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 LENG9Q96B70 501 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 RNPC3Q96LT9 517 aaKnown RBP10.37□□□□□ -0.75
CAPN3-219ENST00000569136 MBOAT7Q96N66 472 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 SETD4Q9NVD3 440 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 EMSYQ7Z589 1322 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 MCM3APO60318 1980 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 RSPH10B2B2RC85 870 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 TBX3O15119 743 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 EDIL3O43854 480 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 MARCH6O60337 910 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 HBP1O60381 514 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 JAK2O60674 1132 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 PRMT3O60678 531 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 GAS7O60861 476 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 BAG4O95429 457 aaKnown RBP10.36□□□□□ -0.75
CAPN3-219ENST00000569136 LARGE1O95461 756 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 MMP1P03956 469 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 RSPH10BP0C881 870 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 CKBP12277 381 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 JAK3P52333 1124 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 EPHB4P54760 987 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 EPHA4P54764 986 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 ADAM17P78536 824 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 SMAD3P84022 425 aaKnown RBP10.36□□□□□ -0.75
CAPN3-219ENST00000569136 PPFIA1Q13136 1202 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 INF2Q27J81 1249 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 C9orf50Q5SZB4 431 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 KRT40Q6A162 431 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 FAM109BQ6ICB4 259 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-219ENST00000569136 SWSAP1Q6NVH7 229 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 NME8Q8N427 588 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 FBXO18Q8NFZ0 1043 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 C8orf76Q96K31 380 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 PCYT2Q99447 389 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 TEKT3Q9BXF9 490 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF302Q9NR11 478 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 NRBP2Q9NSY0 501 aa10.36□□□□□ -0.75
CAPN3-219ENST00000569136 DDX25Q9UHL0 483 aaKnown RBP10.36□□□□□ -0.75
CAPN3-219ENST00000569136 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-219ENST00000569136 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 BTBD18B2RXH4 712 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 TREHO43280 583 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 EFCAB14O75071 495 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 CCNE2O96020 404 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 ACRP10323 421 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 INSRRP14616 1297 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 THPOP40225 353 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF200P98182 395 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-219ENST00000569136 GRIK4Q16099 956 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 LETM2Q2VYF4 491 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 RASIP1Q5U651 963 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 LRCH2Q5VUJ6 765 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 RIPOR1Q6ZS17 1223 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 LRRC8DQ7L1W4 858 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 SLFN12Q8IYM2 578 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 PHOSPHO2Q8TCD6 241 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 ATP8B4Q8TF62 1192 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 FAM167AQ96KS9 214 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPN3-219ENST00000569136 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPN3-219ENST00000569136 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 FOXP1Q9H334 677 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-219ENST00000569136 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 SAMM50Q9Y512 469 aa10.35□□□□□ -0.75
CAPN3-219ENST00000569136 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 ABHD14A-ACY1A0A1B0GW23 586 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 MAGEB2O15479 319 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 CCNT1O60563 726 aaKnown RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 DKC1O60832 514 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 PSMD10O75832 226 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 BAIAP3O94812 1187 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 CXCL10P02778 98 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 FOXK2Q01167 660 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 SWI5Q1ZZU3 235 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 FAM26DQ5JW98 314 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 IER5Q5VY09 327 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 DIS3L2Q8IYB7 885 aaKnown RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 DHX38Q92620 1227 aaKnown RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 SCLYQ96I15 445 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 GPAMQ9HCL2 828 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 CEP131Q9UPN4 1083 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 TELO2Q9Y4R8 837 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms