RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SFI1A8K8P3 1242 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 NBNO60934 754 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 CSF2RAP15509 400 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 AFMP43652 599 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 POU5F1BQ06416 359 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 CAPSQ13938 189 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 FBXO47Q5MNV8 452 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 BSNDQ8WZ55 320 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 DNAJC19Q96DA6 116 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 C7orf25Q9BPX7 421 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 GCOM2Q9BZD3 368 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-224ENST00000568877 OSBPL7Q9BZF2 842 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 TRIM9Q9C026 710 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 C17orf75Q9HAS0 396 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 SQORQ9Y6N5 450 aa18.53■□□□□ 0.56
COMMD4-224ENST00000568877 EVPLQ92817 2033 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 H0YGN5 161 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 TBCAO75347 108 aaKnown RBP18.52■□□□□ 0.56
COMMD4-224ENST00000568877 NR1I2O75469 434 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 FAM13AO94988 1023 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 GHRP10912 638 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 DARSP14868 501 aaKnown RBP18.52■□□□□ 0.56
COMMD4-224ENST00000568877 EIF4BP23588 611 aaKnown RBP18.52■□□□□ 0.56
COMMD4-224ENST00000568877 NAMPTP43490 491 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 ZNF131P52739 623 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 MDM2Q00987 491 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-224ENST00000568877 FPGSQ05932 587 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 LPIN1Q14693 890 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 CNNM4Q6P4Q7 775 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 USP38Q8NB14 1042 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 TMEM40Q8WWA1 233 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
COMMD4-224ENST00000568877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 LRRIQ4A6NIV6 560 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 TNRC18O15417 2968 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 CXCL10P02778 98 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PLS3P13797 630 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PHKA2P46019 1235 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PEX3P56589 373 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PTENP60484 403 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 DMP1Q13316 513 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PPIGQ13427 754 aaKnown RBP eCLIP18.51■□□□□ 0.551e-6■■■■■ 27.3
COMMD4-224ENST00000568877 KANK3Q6NY19 840 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 TSHZ1Q6ZSZ6 1077 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 RPUSD2Q8IZ73 545 aaKnown RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 CCDC34Q96HJ3 373 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 TIGD1Q96MW7 591 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 NFKBIZQ9BYH8 718 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 ZHX3Q9H4I2 956 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 PARVGQ9HBI0 331 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 IL23AQ9NPF7 189 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 LARSQ9P2J5 1176 aaKnown RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 KCNG1Q9UIX4 513 aa18.51■□□□□ 0.55
COMMD4-224ENST00000568877 NOC2LQ9Y3T9 749 aaKnown RBP18.51■□□□□ 0.55
COMMD4-224ENST00000568877 CCDC169A6NNP5 214 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 RPS6KA5O75582 802 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 IDEP14735 1019 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 CASP1P29466 404 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 MAGEA10P43363 369 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-224ENST00000568877 NPTX2P47972 431 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 CUL4BQ13620 913 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 SRGAP1Q7Z6B7 1085 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 IFNLR1Q8IU57 520 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-224ENST00000568877 MYCT1Q8N699 235 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 DEPTORQ8TB45 409 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 SPIRE2Q8WWL2 714 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 VWCEQ96DN2 955 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 NTPCRQ9BSD7 190 aaKnown RBP18.5■□□□□ 0.55
COMMD4-224ENST00000568877 BLZF1Q9H2G9 400 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 AGO3Q9H9G7 860 aaKnown RBP18.5■□□□□ 0.55
COMMD4-224ENST00000568877 DACT1Q9NYF0 836 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 TANC1Q9C0D5 1861 aa18.5■□□□□ 0.55
COMMD4-224ENST00000568877 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 FRMD3A2A2Y4 597 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 GTPBP6O43824 516 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-224ENST00000568877 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
COMMD4-224ENST00000568877 CSDE1O75534 798 aaKnown RBP18.49■□□□□ 0.55
COMMD4-224ENST00000568877 MYL1P05976 194 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 PFKMP08237 780 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 ACRP10323 421 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 CD52P31358 61 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 ASIC1P78348 528 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 PLEKHG4Q58EX7 1191 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 ODR4Q5SWX8 454 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-224ENST00000568877 FAM228AQ86W67 206 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 ZBTB8OSQ8IWT0 167 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 CCDC65Q8IXS2 484 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 KIFC3Q9BVG8 833 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 IFIH1Q9BYX4 1025 aaKnown RBP18.49■□□□□ 0.55
COMMD4-224ENST00000568877 C2orf40Q9H1Z8 148 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 MINDY3Q9H8M7 445 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 KMT5AQ9NQR1 393 aa18.49■□□□□ 0.55
COMMD4-224ENST00000568877 PANK4Q9NVE7 773 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms