RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GPC3P51654 580 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 FUT2Q10981 343 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 TDGQ13569 410 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 RTN1Q16799 776 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 TMC5Q6UXY8 1006 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 OTOP3Q7RTS5 596 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 TMEM173Q86WV6 379 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 AUTS2Q8WXX7 1259 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 DUSP12Q9UNI6 340 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 OATP04181 439 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 ANGPT1Q15389 498 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 GPR149Q86SP6 731 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 FBXL21Q9UKT6 434 aa13.34□□□□□ -0.27
GTF3C1-209ENST00000568569 ZBTB43O43298 467 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 PI15O43692 258 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 NPR3P17342 541 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 FGFR4P22455 802 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 PHKA2P46019 1235 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 PRKCEQ02156 737 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 PRR16Q569H4 304 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 GLB1LQ6UWU2 654 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 SIX5Q8N196 739 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 DTWD2Q8NBA8 298 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 GCOM2Q9BZD3 368 aaPredicted RBP13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 NRBP2Q9NSY0 501 aa13.33□□□□□ -0.28
GTF3C1-209ENST00000568569 EVPLQ92817 2033 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 ZNF862O60290 1169 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 GALTP07902 379 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 SKIP12755 728 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 CDC42EP1Q00587 391 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 TBC1D8BQ0IIM8 1120 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 NECTIN1Q15223 517 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 SEMA4AQ9H3S1 761 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 NRDE2Q9H7Z3 1164 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 STK39Q9UEW8 545 aa13.32□□□□□ -0.28
GTF3C1-209ENST00000568569 FRYLO94915 3013 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 ZNF292O60281 2723 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 ESYT2A0FGR8 921 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 CIITAP33076 1130 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 REXO1Q8N1G1 1221 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 FEZF2Q8TBJ5 459 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 LPPQ93052 612 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 ZMYND12Q9H0C1 365 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 INPP5FQ9Y2H2 1132 aa13.31□□□□□ -0.28
GTF3C1-209ENST00000568569 LMNAP02545 664 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 KLRC2P26717 231 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 RAB27AP51159 221 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 CLCN4P51793 760 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 RCAN1P53805 252 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 DRP2Q13474 957 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 NONOQ15233 471 aaKnown RBP eCLIP13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 CCDC12Q8WUD4 166 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 LENG9Q96B70 501 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 VN1R3Q9BXE9 311 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 INO80BQ9C086 356 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 FAM105AQ9NUU6 356 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 WNT16Q9UBV4 365 aa13.3□□□□□ -0.28
GTF3C1-209ENST00000568569 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms