RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 SNX14Q9Y5W7 946 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 CYP46A1Q9Y6A2 500 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 COL4A4P53420 1690 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 COL1A2P08123 1366 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ADGRA3Q8IWK6 1321 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 IGSF9BQ9UPX0 1349 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM86B1E9PN63 330 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 C5orf67F2Z3F1 127 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 TPD52L2O43399 206 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 GAS7O60861 476 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 DGKIO75912 1065 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CDKL5O76039 1030 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM86B2P0C5J1 330 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 ALADP13716 330 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CPA1P15085 419 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 RPS6KB1P23443 525 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 SFNP31947 248 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 DNM2P50570 870 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CRYBB1P53674 252 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PRSS12P56730 875 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CDC42EP1Q00587 391 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 MGAT3Q09327 533 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 ITGB3BPQ13352 177 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 BMS1Q14692 1282 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 TCEAL5Q5H9L2 206 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM31Q5JXX7 168 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 C6orf132Q5T0Z8 1188 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PTCRAQ6ISU1 281 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 RUFY3Q7L099 469 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 SPRED2Q7Z698 418 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 EXOC8Q8IYI6 725 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CMTR2Q8IYT2 770 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM174AQ8TBP5 190 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 TRAPPC12Q8WVT3 735 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PHKBQ93100 1093 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PABPC5Q96DU9 382 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 SCLT1Q96NL6 688 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 NECAB3Q96P71 396 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 UIMC1Q96RL1 719 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 MAP7D2Q96T17 732 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PCYT2Q99447 389 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 TEKT3Q9BXF9 490 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 RNF26Q9BY78 433 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 UPF3BQ9BZI7 483 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PIF1Q9H611 641 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 IGFLR1Q9H665 355 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 CLDND1Q9NY35 253 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 GABBR1Q9UBS5 961 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 PUF60Q9UHX1 559 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 AKT3Q9Y243 479 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 HCN4Q9Y3Q4 1203 aa5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-213ENST00000568358 KDM3AQ9Y4C1 1321 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 IGKV6D-21A0A0A0MT36 114 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 FSD2A1L4K1 749 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 TBKBP1A7MCY6 615 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 WDR64B1ANS9 1081 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 CFAP99D6REC4 459 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 H3BQ06 376 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PPFIA3O75145 1194 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 DEXIO95424 95 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 CCNE2O96020 404 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SRGAP2BP0DMP2 458 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 IFNAR1P17181 557 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PDIA3P30101 505 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 CIITAP33076 1130 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SCNN1AP37088 669 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SARSP49591 514 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 JAK3P52333 1124 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 FANCCQ00597 558 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 KRT17Q04695 432 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 TBC1D8BQ0IIM8 1120 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 COL9A3Q14050 684 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PKN1Q16512 942 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM266Q2M3C6 531 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PAN2Q504Q3 1202 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 LRCH2Q5VUJ6 765 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 GALNT17Q6IS24 598 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 EFCAB12Q6NXP0 572 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 NYAP1Q6ZVC0 841 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SLC24A5Q71RS6 500 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SKAP1Q86WV1 359 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 NT5DC4Q86YG4 428 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM178BQ8IXR5 827 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ABI1Q8IZP0 508 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 GJD3Q8N144 294 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM87AQ8NBN3 555 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 P2RX5Q93086 422 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ZNF689Q96CS4 500 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ZBTB10Q96DT7 871 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ZNF274Q96GC6 653 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 POP1Q99575 1024 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 RIT2Q99578 217 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ADAM2Q99965 735 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 OSBPL7Q9BZF2 842 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms