RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 PRELPP51888 382 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 STAT2P52630 851 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 RBM5P52756 815 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 CAV1Q03135 178 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 PTK2Q05397 1052 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 KLRC3Q07444 240 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 PPP2R5CQ13362 524 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 BYSLQ13895 437 aaKnown RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 RASA3Q14644 834 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 MEX3CQ5U5Q3 659 aaKnown RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 CDC42EP5Q6NZY7 148 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 THSD4Q6ZMP0 1018 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 CCDC121Q6ZUS5 278 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 SYDE1Q6ZW31 735 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 ENOSF1Q7L5Y1 443 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 IRF2BP2Q7Z5L9 587 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 SFR1Q86XK3 245 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 BBOF1Q8ND07 529 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 TPCN2Q8NHX9 752 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 CENPTQ96BT3 561 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 ACCSQ96QU6 501 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 EIF2AK1Q9BQI3 630 aaKnown RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 WNT8AQ9H1J5 351 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 POLLQ9UGP5 575 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 TRPC5Q9UL62 973 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-250ENST00000568290 NFU1Q9UMS0 254 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 FAM169AQ9Y6X4 670 aa8.28□□□□□ -1.08
ATXN3-250ENST00000568290 BTAF1O14981 1849 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 WTIPA6NIX2 430 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MEFVO15553 781 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 EXOC3O60645 756 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MED24O75448 989 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 FTCDO95954 541 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MYBP10242 640 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 GZMAP12544 262 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 CCT5P48643 541 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 SMTNP53814 917 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 GYS2P54840 703 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 BPIFB4P59827 614 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MYL7Q01449 175 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 ARID5AQ03989 594 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 ADCY2Q08462 1091 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MMRN1Q13201 1228 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 PABPC4Q13310 644 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 AOC3Q16853 763 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 CEP85LQ5SZL2 805 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 C6orf118Q5T5N4 469 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 LRCH2Q5VUJ6 765 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 C11orf63Q6NUN7 778 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MMS22LQ6ZRQ5 1243 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 KCTD1Q719H9 257 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 SUGP1Q8IWZ8 645 aaKnown RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 C12orf56Q8IXR9 622 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 MICALL1Q8N3F8 863 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 ANKK1Q8NFD2 765 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 GRK7Q8WTQ7 553 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 WNT2BQ93097 391 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 FMO2Q99518 471 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 REEP2Q9BRK0 252 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 ROPN1BQ9BZX4 212 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 BHMT2Q9H2M3 363 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 ROPN1Q9HAT0 212 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 CNOT7Q9UIV1 285 aaKnown RBP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATXN3-250ENST00000568290 FRMPD4Q14CM0 1322 aa8.27□□□□□ -1.09
ATXN3-250ENST00000568290 FOCADQ5VW36 1801 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 LY75O60449 1722 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 QSER1Q2KHR3 1735 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 ATRNL1Q5VV63 1379 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GMNCA6NCL1 334 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 MEIS2O14770 477 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 EPHB6O15197 1021 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 TLR2O60603 784 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CD46P15529 392 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CXCR5P32302 372 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GTF2H1P32780 548 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 LSP1P33241 339 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 FMO5P49326 533 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF131P52739 623 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 MFAP3P55082 362 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms