RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 TMEM117Q9H0C3 514 aa14.42□□□□□ -0.1
TSC2-220ENST00000568238 IGFLR1Q9H665 355 aa14.42□□□□□ -0.1
TSC2-220ENST00000568238 SUCLA2Q9P2R7 463 aaPredicted RBP14.42□□□□□ -0.1
TSC2-220ENST00000568238 HCSTQ9UBK5 93 aa14.42□□□□□ -0.1
TSC2-220ENST00000568238 CSDE1O75534 798 aaKnown RBP14.41□□□□□ -0.1
TSC2-220ENST00000568238 P4HBP07237 508 aaKnown RBP14.41□□□□□ -0.1
TSC2-220ENST00000568238 LAG3P18627 525 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 FGFR4P22455 802 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 SFPQP23246 707 aaKnown RBP eCLIP14.41□□□□□ -0.1
TSC2-220ENST00000568238 GTF2F1P35269 517 aaKnown RBP eCLIP14.41□□□□□ -0.1
TSC2-220ENST00000568238 IRS1P35568 1242 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 LTBRP36941 435 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 UBE3AQ05086 875 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
TSC2-220ENST00000568238 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
TSC2-220ENST00000568238 NCAPH2Q6IBW4 605 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 ZNF410Q86VK4 478 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 ECHDC2Q86YB7 292 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 RHPN2Q8IUC4 686 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 THNSL1Q8IYQ7 743 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 LRRC43Q8N309 656 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 COLGALT1Q8NBJ5 622 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 RNF169Q8NCN4 708 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 SLC7A3Q8WY07 619 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 TNFRSF25Q93038 417 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 NLRP4Q96MN2 994 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 C1QTNF1Q9BXJ1 281 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 CYP26B1Q9NR63 512 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 RNF19AQ9NV58 838 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 TYW1Q9NV66 732 aaKnown RBP14.41□□□□□ -0.1
TSC2-220ENST00000568238 DACT1Q9NYF0 836 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 PPME1Q9Y570 386 aa14.41□□□□□ -0.1
TSC2-220ENST00000568238 A0A087WZ62 844 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 VPS37CA5D8V6 355 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 TBX10O75333 385 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 FGF18O76093 207 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 SSTR3P32745 418 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 NDUFV1P49821 464 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 POLGP54098 1239 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 DLX2Q07687 328 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 EPHA7Q15375 998 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 CLUL1Q15846 466 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 MCTP1Q6DN14 999 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 GJD3Q8N144 294 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 CEP170P1Q96L14 293 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 CASD1Q96PB1 797 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 FDXACB1Q9BRP7 624 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 INO80BQ9C086 356 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 CWH43Q9H720 699 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 CD320Q9NPF0 282 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
TSC2-220ENST00000568238 WRAP73Q9P2S5 460 aaPredicted RBP14.4□□□□□ -0.1
TSC2-220ENST00000568238 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 LINC01565O15544 149 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 PDCP20941 246 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
TSC2-220ENST00000568238 PPM1AP35813 382 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 RFC5P40937 340 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 NRIP1P48552 1158 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 NPEPPSP55786 919 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 SPIRE1Q08AE8 756 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 SMAD4Q13485 552 aaKnown RBP14.39□□□□□ -0.11
TSC2-220ENST00000568238 CALCRLQ16602 461 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 CLLU1OSQ5K130 101 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 TWF2Q6IBS0 349 aaKnown RBP14.39□□□□□ -0.11
TSC2-220ENST00000568238 ZNF598Q86UK7 904 aaKnown RBP14.39□□□□□ -0.11
TSC2-220ENST00000568238 C4orf19Q8IY42 314 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 CHST12Q9NRB3 414 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 PRKAG3Q9UGI9 489 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
TSC2-220ENST00000568238 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
TSC2-220ENST00000568238 GAS2O43903 313 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 NEMFO60524 1076 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 EOMESO95936 686 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 ATF7P17544 494 aaPredicted RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 COL9A1P20849 921 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 ANP32AP39687 249 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 CYP4A11Q02928 519 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 LRRC55Q6ZSA7 311 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 OTUD6AQ7L8S5 288 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 CATSPER4Q7RTX7 472 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 RBM23Q86U06 439 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 KSR1Q8IVT5 923 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 HELQQ8TDG4 1101 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 MICAL1Q8TDZ2 1067 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.11
TSC2-220ENST00000568238 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 ZNF558Q96NG5 402 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 MRPL9Q9BYD2 267 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 EPHX3Q9H6B9 360 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 DHX33Q9H6R0 707 aaKnown RBP14.38□□□□□ -0.11
TSC2-220ENST00000568238 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms