RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ODR4Q5SWX8 454 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 HYIQ5T013 277 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 ZNF410Q86VK4 478 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 ASAP3Q8TDY4 903 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 FTHL17Q9BXU8 183 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 MINDY3Q9H8M7 445 aa14.46□□□□□ -0.09
CNOT1-213ENST00000568158 SRPRBQ9Y5M8 271 aaKnown RBP14.46□□□□□ -0.09
CNOT1-213ENST00000568158 CA3P07451 260 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 GLRA2P23416 452 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 UBA7P41226 1012 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 NASPP49321 788 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-213ENST00000568158 DSC3Q14574 896 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 STK38Q15208 465 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 FAM102BQ5T8I3 360 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 ZNF697Q5TEC3 545 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 LINC00301Q8NCQ3 95 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 EPSTI1Q96J88 318 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 AK8Q96MA6 479 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 RAD9AQ99638 391 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 INO80BQ9C086 356 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-213ENST00000568158 POLR3FQ9H1D9 316 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-213ENST00000568158 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-213ENST00000568158 ZNF576Q9H609 170 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 SLC28A3Q9HAS3 691 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 RGS18Q9NS28 235 aa14.45□□□□□ -0.1
CNOT1-213ENST00000568158 TTC3P53804 2025 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 DENND3A2RUS2 1198 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 BRD1O95696 1058 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 CAPSQ13938 189 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 MXD4Q14582 209 aaPredicted RBP14.44□□□□□ -0.1
CNOT1-213ENST00000568158 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
CNOT1-213ENST00000568158 TMEM119Q4V9L6 283 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 RINT1Q6NUQ1 792 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 SRGAP1Q7Z6B7 1085 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 LRRC15Q8TF66 581 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 CALML4Q96GE6 196 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 CDK5RAP3Q96JB5 506 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 CHAMP1Q96JM3 812 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 NT5C3AQ9H0P0 336 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 CERS4Q9HA82 394 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 MYO9BQ13459 2157 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
CNOT1-213ENST00000568158 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 C9IYK1 514 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 SPTLC2O15270 562 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 SSBP05455 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 PLA2G4BP0C869 781 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 ZSCAN20P17040 1043 aaPredicted RBP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 PTENP60484 403 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 FAM189BP81408 668 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 HTRA4P83105 476 aaPredicted RBP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 DNM1Q05193 864 aaKnown RBP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 DHX8Q14562 1220 aaKnown RBP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 GRIN2CQ14957 1233 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 CATSPER4Q7RTX7 472 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 SPRED2Q7Z698 418 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 CRIPAKQ8N1N5 446 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 SYT2Q8N9I0 419 aaPredicted RBP14.43□□□□□ -0.1
CNOT1-213ENST00000568158 MCPH1Q8NEM0 835 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 BSNDQ8WZ55 320 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 PANK2Q9BZ23 570 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 CCSER1Q9C0I3 900 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 INSL6Q9Y581 213 aa14.43□□□□□ -0.1
CNOT1-213ENST00000568158 SFI1A8K8P3 1242 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 PLCG1P19174 1290 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
CNOT1-213ENST00000568158 TAP1Q03518 808 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 POU5F1BQ06416 359 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 TFDP1Q14186 410 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 PPP2R2DQ66LE6 453 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 SLC24A5Q71RS6 500 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 KRI1Q8N9T8 703 aaKnown RBP14.42□□□□□ -0.1
CNOT1-213ENST00000568158 SYMPKQ92797 1274 aaKnown RBP14.42□□□□□ -0.1
CNOT1-213ENST00000568158 YME1L1Q96TA2 773 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 BLOC1S4Q9NUP1 217 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 LRFN2Q9ULH4 789 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 PCDHB7Q9Y5E2 793 aa14.42□□□□□ -0.1
CNOT1-213ENST00000568158 MORC2Q9Y6X9 1032 aaPredicted RBP14.42□□□□□ -0.1
CNOT1-213ENST00000568158 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 INO80B-WBP1J3KQ70 363 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 RFXAPO00287 272 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 SLC26A4O43511 780 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 PPP6R2O75170 966 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 DGKIO75912 1065 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 YEATS4O95619 227 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 STAG3L1P0CL83 205 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 SFPQP23246 707 aaKnown RBP eCLIP14.41□□□□□ -0.1
CNOT1-213ENST00000568158 PHKA2P46019 1235 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 GATMP50440 423 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 SLC12A3P55017 1021 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 RAD51AP2Q09MP3 1159 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 MCM6Q14566 821 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 ARSHQ5FYA8 562 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
CNOT1-213ENST00000568158 NPAS4Q8IUM7 802 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms