RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 LRFN3Q9BTN0 628 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 NDST4Q9H3R1 872 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 ST6GALNAC4Q9H4F1 302 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 RBPJLQ9UBG7 517 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 WDR81Q562E7 1941 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 A0A1W2PQJ5 194 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 HIP1RO75146 1068 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 SCP2P22307 547 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 DNAJB2P25686 324 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
COMMD4-221ENST00000567935 ODR4Q5SWX8 454 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 FRMD5Q7Z6J6 570 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 TMEM139Q8IV31 216 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 NELFCDQ8IXH7 590 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 HVCN1Q96D96 273 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
COMMD4-221ENST00000567935 MMP19Q99542 508 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 EDEM3Q9BZQ6 932 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 CAPN11Q9UMQ6 739 aa16.05■□□□□ 0.16
COMMD4-221ENST00000567935 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 MYBP10242 640 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 NR2F2P24468 414 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 CASP5P51878 434 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 EPHB4P54760 987 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ACTR2P61160 394 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ERVK-24P63145 666 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 CNTN2Q02246 1040 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 MAPK7Q13164 816 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ADAM9Q13443 819 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ZNF720Q7Z2F6 126 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 TRIM59Q8IWR1 403 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ZNF397Q8NF99 534 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-221ENST00000567935 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 USP6NLQ92738 828 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 MKNK1Q9BUB5 465 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 FGFBP2Q9BYJ0 223 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 ZNF576Q9H609 170 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 TMEM206Q9H813 350 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 PDLIM7Q9NR12 457 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 LUC7L2Q9Y383 392 aaKnown RBP16.04■□□□□ 0.16
COMMD4-221ENST00000567935 PPME1Q9Y570 386 aa16.04■□□□□ 0.16
COMMD4-221ENST00000567935 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 ATG7O95352 703 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 PLS3P13797 630 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 CASP14P31944 242 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
COMMD4-221ENST00000567935 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-221ENST00000567935 ABRAQ8N0Z2 381 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 C17orf53Q8N3J3 647 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-221ENST00000567935 MCPH1Q8NEM0 835 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 GPRC5AQ8NFJ5 357 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 MORC4Q8TE76 937 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 TRIM43Q96BQ3 446 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-221ENST00000567935 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 STRA6Q9BX79 667 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 TXNRD2Q9NNW7 524 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 ABHD10Q9NUJ1 306 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 GABBR1Q9UBS5 961 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 MYH9P35579 1960 aaKnown RBP16.03■□□□□ 0.16
COMMD4-221ENST00000567935 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
COMMD4-221ENST00000567935 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 ASTN1O14525 1302 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 ASB14A6NK59 587 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 H0YCG3 227 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 DNM1LO00429 736 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 ZBTB39O15060 712 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 PPP1R37O75864 691 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 PRPF6O94906 941 aaKnown RBP16.02■□□□□ 0.16
COMMD4-221ENST00000567935 NR3C1P04150 777 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
COMMD4-221ENST00000567935 TRIM21P19474 475 aaKnown RBP16.02■□□□□ 0.16
COMMD4-221ENST00000567935 KRT9P35527 623 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 ZBED6P86452 979 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 SYCP1Q15431 976 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 PTPN14Q15678 1187 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 CCDC85BQ15834 202 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-221ENST00000567935 UGCGQ16739 394 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 TRIM60Q495X7 471 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 SLC9A9Q8IVB4 645 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms