RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 MAFO75444 373 aaPredicted RBP11.49□□□□□ -0.57
TCF4-236ENST00000567880 TPM2P07951 284 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 ZNF18P17022 549 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 HOXD13P35453 343 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 NPTX2P47972 431 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 FANCCQ00597 558 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 DRP2Q13474 957 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 CDKAL1Q5VV42 579 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 ZNF507Q8TCN5 953 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 KCTD10Q9H3F6 313 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
TCF4-236ENST00000567880 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 SIP14410 1827 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 KCNJ18B7U540 433 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 GPR37O15354 613 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
TCF4-236ENST00000567880 BRCA2P51587 3418 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ZNF75DP51815 510 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 PPFIA1Q13136 1202 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 KCNJ12Q14500 433 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 EFCAB12Q6NXP0 572 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 C17orf75Q9HAS0 396 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 SPC25Q9HBM1 224 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 PTCH2Q9Y6C5 1203 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 UBE4BO95155 1302 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ADGRA3Q8IWK6 1321 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 DENND3A2RUS2 1198 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 LRRIQ4A6NIV6 560 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 F2P00734 622 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
TCF4-236ENST00000567880 GLRA2P23416 452 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 KLRC1P26715 233 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ARL2P36404 184 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 CLCN3P51790 818 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 UBASH3AP57075 661 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 RTP1P59025 263 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 CCDC173Q0VFZ6 552 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 MFSD10Q14728 455 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 KAT2BQ92831 832 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
TCF4-236ENST00000567880 THAP9Q9H5L6 903 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
TCF4-236ENST00000567880 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
TCF4-236ENST00000567880 SCN10AQ9Y5Y9 1956 aa11.48□□□□□ -0.57
TCF4-236ENST00000567880 CLIC2O15247 247 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 C22orf31O95567 290 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 INHAP05111 366 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GJB1P08034 283 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GRK4P32298 578 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GJA9P57773 515 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 ALCAMQ13740 583 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 GRIK4Q16099 956 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 TCP11X2Q5H9J9 407 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 IER5Q5VY09 327 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 IRF2BP1Q8IU81 584 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 NOC3LQ8WTT2 800 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 TCP11Q8WWU5 503 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PRPF31Q8WWY3 499 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 PSPC1Q8WXF1 523 aaKnown RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 ZNF668Q96K58 619 aaPredicted RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 JPH2Q9BR39 696 aaPredicted RBP11.47□□□□□ -0.57
TCF4-236ENST00000567880 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SETD4Q9NVD3 440 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 COL1A2P08123 1366 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 IGKV6-21A0A0C4DH24 114 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PDXKO00764 312 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SMIM10L2AP0DMW4 78 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 SMIM10L2BP0DMW5 78 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 NR2F2P24468 414 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 NAMPTP43490 491 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 PSEN2P49810 448 aa11.47□□□□□ -0.57
TCF4-236ENST00000567880 DNM2P50570 870 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms