RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 POLGP54098 1239 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 ADAM15Q13444 863 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 EPHA7Q15375 998 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 CLLU1OSQ5K130 101 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 TPH2Q8IWU9 490 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 ELAC1Q9H777 363 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 AAASQ9NRG9 546 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 WDR81Q562E7 1941 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 NT5C1B-RDH14C9J2C7 533 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 SRGAP2CP0DJJ0 459 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 TXKP42681 527 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 SPIRE1Q08AE8 756 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 TRIM29Q14134 588 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 TLE6Q9H808 572 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 BARX2Q9UMQ3 279 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
GTF3C1-208ENST00000567843 ATG2AQ2TAZ0 1938 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 MEIS3P2A8K0S8 358 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 TBX3O15119 743 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 MBTPS2O43462 519 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 NCK2O43639 380 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 LAG3P18627 525 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 CALCRLQ16602 461 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 SLC7A3Q8WY07 619 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 TLR9Q9NR96 1032 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 CLEC1BQ9P126 229 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-208ENST00000567843 HOXA2O43364 376 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 SLITRK3O94933 977 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 GLP2RO95838 553 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 CA8P35219 290 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 PHKA2P46019 1235 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 EMC2Q15006 297 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 ZNF410Q86VK4 478 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 TCF25Q9BQ70 676 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 TTC12Q9H892 705 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 IFT122Q9HBG6 1241 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 ENTPD7Q9NQZ7 604 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 DACT1Q9NYF0 836 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 CD207Q9UJ71 328 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
GTF3C1-208ENST00000567843 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 NEMFO60524 1076 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 MCM7P33993 719 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 RFC5P40937 340 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 CDC42EP1Q00587 391 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 ZP2Q05996 745 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 RNF149Q8NC42 400 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 VN1R2Q8NFZ6 395 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 PIGOQ8TEQ8 1089 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 LRFN3Q9BTN0 628 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 INO80BQ9C086 356 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 DHX33Q9H6R0 707 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 C11orf16Q9NQ32 467 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms