RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
PKD1-233ENST00000567355 XPNPEP1Q9NQW7 623 aa18.51■□□□□ 0.55
PKD1-233ENST00000567355 ANKEF1Q9NU02 776 aa18.51■□□□□ 0.55
PKD1-233ENST00000567355 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
PKD1-233ENST00000567355 BRWD1Q9NSI6 2320 aa18.51■□□□□ 0.55
PKD1-233ENST00000567355 POTEMA6NI47 508 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 ATF7P17544 494 aaPredicted RBP18.5■□□□□ 0.55
PKD1-233ENST00000567355 ATP2B1P20020 1258 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 SFPQP23246 707 aaKnown RBP eCLIP18.5■□□□□ 0.55
PKD1-233ENST00000567355 DNAJB1P25685 340 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 KCNQ1P51787 676 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 LAMTOR4Q0VGL1 99 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 EMC2Q15006 297 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 XKR9Q5GH70 373 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 SPPL3Q8TCT6 385 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 TMEM143Q96AN5 459 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 CASD1Q96PB1 797 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 INO80BQ9C086 356 aaPredicted RBP18.5■□□□□ 0.55
PKD1-233ENST00000567355 NSUN3Q9H649 340 aaKnown RBP18.5■□□□□ 0.55
PKD1-233ENST00000567355 CWH43Q9H720 699 aa18.5■□□□□ 0.55
PKD1-233ENST00000567355 TBKBP1A7MCY6 615 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 EOMESO95936 686 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 ITGB1P05556 798 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 OR52Z1P0C646 297 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 XRCC6P12956 609 aaKnown RBP eCLIP18.49■□□□□ 0.55
PKD1-233ENST00000567355 RARRES1P49788 294 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 TOB1P50616 345 aaPredicted RBP18.49■□□□□ 0.55
PKD1-233ENST00000567355 ZNF174Q15697 407 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 TCEAL5Q5H9L2 206 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 TTC38Q5R3I4 469 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 FERMT3Q86UX7 667 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 KLHL23Q8NBE8 558 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 ADAMTS19Q8TE59 1207 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 PSPC1Q8WXF1 523 aaKnown RBP18.49■□□□□ 0.55
PKD1-233ENST00000567355 NLRP4Q96MN2 994 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 TMEM117Q9H0C3 514 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 UBE2ZQ9H832 354 aaPredicted RBP18.49■□□□□ 0.55
PKD1-233ENST00000567355 ALG13Q9NP73 1137 aaKnown RBP18.49■□□□□ 0.55
PKD1-233ENST00000567355 TYW1Q9NV66 732 aaKnown RBP18.49■□□□□ 0.55
PKD1-233ENST00000567355 DACT1Q9NYF0 836 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 HCSTQ9UBK5 93 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 PLXNA4Q9HCM2 1894 aa18.49■□□□□ 0.55
PKD1-233ENST00000567355 ASAP2O43150 1006 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 HOXA2O43364 376 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 IBSPP21815 317 aaPredicted RBP18.48■□□□□ 0.55
PKD1-233ENST00000567355 PHKA2P46019 1235 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 MCM2P49736 904 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 CLLU1OSQ5K130 101 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 SRGAP1Q7Z6B7 1085 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 CATSPER3Q86XQ3 398 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 TCP11Q8WWU5 503 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 MTRQ99707 1265 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 POLR3CQ9BUI4 534 aaPredicted RBP18.48■□□□□ 0.55
PKD1-233ENST00000567355 MINDY3Q9H8M7 445 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 TUFT1Q9NNX1 390 aa18.48■□□□□ 0.55
PKD1-233ENST00000567355 BMP2KQ9NSY1 1161 aaPredicted RBP18.48■□□□□ 0.55
PKD1-233ENST00000567355 MED24O75448 989 aa18.47■□□□□ 0.55
PKD1-233ENST00000567355 DGAT1O75907 488 aa18.47■□□□□ 0.55
PKD1-233ENST00000567355 TECP42680 631 aa18.47■□□□□ 0.55
PKD1-233ENST00000567355 IFNLR1Q8IU57 520 aaPredicted RBP18.47■□□□□ 0.55
PKD1-233ENST00000567355 PABPC5Q96DU9 382 aaKnown RBP18.47■□□□□ 0.55
PKD1-233ENST00000567355 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
PKD1-233ENST00000567355 ZNF623O75123 536 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 RPA1P27694 616 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 HOXA11P31270 313 aaPredicted RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 ARL2P36404 184 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 FXR2P51116 673 aaKnown RBP eCLIP18.46■□□□□ 0.55
PKD1-233ENST00000567355 POU5F1BQ06416 359 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 MXD4Q14582 209 aaPredicted RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 NBR1Q14596 966 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 CTC1Q2NKJ3 1217 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 LEXMQ3ZCV2 418 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 PIGOQ8TEQ8 1089 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 POF1BQ8WVV4 589 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 DBR1Q9UK59 544 aaKnown RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 PIN4Q9Y237 131 aaKnown RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 MYO7AQ13402 2215 aa18.46■□□□□ 0.55
PKD1-233ENST00000567355 TCF20Q9UGU0 1960 aaKnown RBP18.46■□□□□ 0.55
PKD1-233ENST00000567355 A0A087WWV3 80 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 SRGAP2CP0DJJ0 459 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 PTENP60484 403 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 UBE3AQ05086 875 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 HYAL1Q12794 435 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 GNL2Q13823 731 aaKnown RBP18.45■□□□□ 0.54
PKD1-233ENST00000567355 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 CATSPER4Q7RTX7 472 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 LRRC43Q8N309 656 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 RNF149Q8NC42 400 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 ASAP3Q8TDY4 903 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 RSPH1Q8WYR4 309 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 UHRF1Q96T88 793 aaPredicted RBP18.45■□□□□ 0.54
PKD1-233ENST00000567355 AAASQ9NRG9 546 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 FAM105AQ9NUU6 356 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 PCDHB6Q9Y5E3 794 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 PCDHB12Q9Y5F1 795 aa18.45■□□□□ 0.54
PKD1-233ENST00000567355 C5orf42Q9H799 3197 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms