RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 SFPQP23246 707 aaKnown RBP eCLIP24.03■■□□□ 1.44
NME3-210ENST00000567271 GLRA2P23416 452 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 MARCKSP29966 332 aaPredicted RBP24.03■■□□□ 1.44
NME3-210ENST00000567271 POU5F1BQ06416 359 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 GRB10Q13322 594 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 GRIN2CQ14957 1233 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 SLC39A14Q15043 492 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 SLC24A5Q71RS6 500 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 MAEAQ7L5Y9 396 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 KCNK18Q7Z418 384 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 SRGAP1Q7Z6B7 1085 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 CABP7Q86V35 215 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 ZNF396Q96N95 335 aaPredicted RBP24.03■■□□□ 1.44
NME3-210ENST00000567271 NT5C3AQ9H0P0 336 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 POLR3FQ9H1D9 316 aaPredicted RBP24.03■■□□□ 1.44
NME3-210ENST00000567271 GPRC5CQ9NQ84 441 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 C1orf112Q9NSG2 853 aa24.03■■□□□ 1.44
NME3-210ENST00000567271 FBXO2Q9UK22 296 aaPredicted RBP24.03■■□□□ 1.44
NME3-210ENST00000567271 SRPRBQ9Y5M8 271 aaKnown RBP24.03■■□□□ 1.44
NME3-210ENST00000567271 C9IYK1 514 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 ZSCAN20P17040 1043 aaPredicted RBP24.02■■□□□ 1.44
NME3-210ENST00000567271 UBA7P41226 1012 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 NASPP49321 788 aaPredicted RBP24.02■■□□□ 1.44
NME3-210ENST00000567271 SARSP49591 514 aaKnown RBP24.02■■□□□ 1.44
NME3-210ENST00000567271 TAP1Q03518 808 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 TFDP1Q14186 410 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 NPAS4Q8IUM7 802 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 SP7Q8TDD2 431 aaPredicted RBP24.02■■□□□ 1.44
NME3-210ENST00000567271 YME1L1Q96TA2 773 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 MINDY3Q9H8M7 445 aa24.02■■□□□ 1.44
NME3-210ENST00000567271 SLC34A2O95436 690 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 PHKA2P46019 1235 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 FAM189BP81408 668 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 CAPSQ13938 189 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 TMEM119Q4V9L6 283 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 FAM102BQ5T8I3 360 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 CDK5RAP3Q96JB5 506 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 PLIN2Q99541 437 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 CDX2Q99626 313 aaPredicted RBP24.01■■□□□ 1.43
NME3-210ENST00000567271 CSRNP2Q9H175 543 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 CHST12Q9NRB3 414 aa24.01■■□□□ 1.43
NME3-210ENST00000567271 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
NME3-210ENST00000567271 LINC01553A4QN01 128 aa24■■□□□ 1.43
NME3-210ENST00000567271 DGKIO75912 1065 aa24■■□□□ 1.43
NME3-210ENST00000567271 STAG3L1P0CL83 205 aa24■■□□□ 1.43
NME3-210ENST00000567271 PTENP60484 403 aa24■■□□□ 1.43
NME3-210ENST00000567271 CATSPER4Q7RTX7 472 aa24■■□□□ 1.43
NME3-210ENST00000567271 IFNLR1Q8IU57 520 aaPredicted RBP24■■□□□ 1.43
NME3-210ENST00000567271 LINC00301Q8NCQ3 95 aa24■■□□□ 1.43
NME3-210ENST00000567271 CALML4Q96GE6 196 aa24■■□□□ 1.43
NME3-210ENST00000567271 RC3H2Q9HBD1 1191 aaKnown RBP24■■□□□ 1.43
NME3-210ENST00000567271 ZNF689Q96CS4 500 aaPredicted RBP23.99■■□□□ 1.43
NME3-210ENST00000567271 CLIC6Q96NY7 704 aa23.99■■□□□ 1.43
NME3-210ENST00000567271 NFKBIZQ9BYH8 718 aa23.99■■□□□ 1.43
NME3-210ENST00000567271 RNF216Q9NWF9 866 aaPredicted RBP23.99■■□□□ 1.43
NME3-210ENST00000567271 LRFN2Q9ULH4 789 aa23.99■■□□□ 1.43
NME3-210ENST00000567271 PCDHB7Q9Y5E2 793 aa23.99■■□□□ 1.43
NME3-210ENST00000567271 CHD7Q9P2D1 2997 aa23.99■■□□□ 1.43
NME3-210ENST00000567271 STK38Q15208 465 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 RINT1Q6NUQ1 792 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 C1orf186Q6ZWK4 172 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 SPRED2Q7Z698 418 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 KRI1Q8N9T8 703 aaKnown RBP23.98■■□□□ 1.43
NME3-210ENST00000567271 CCSER1Q9C0I3 900 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 PRDM12Q9H4Q4 367 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 ELAC1Q9H777 363 aaKnown RBP23.98■■□□□ 1.43
NME3-210ENST00000567271 DACT1Q9NYF0 836 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 ZDHHC9Q9Y397 364 aa23.98■■□□□ 1.43
NME3-210ENST00000567271 BRD1O95696 1058 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 IBSPP21815 317 aaPredicted RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 KARSQ15046 597 aaKnown RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 PCBP1Q15365 356 aaKnown RBP eCLIP23.97■■□□□ 1.43
NME3-210ENST00000567271 FOXD4L6Q3SYB3 417 aaPredicted RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 SPECC1Q5M775 1068 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 FOXD4L3Q6VB84 417 aaPredicted RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 USP49Q70CQ1 688 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 SYT2Q8N9I0 419 aaPredicted RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 BSNDQ8WZ55 320 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 KIFAP3Q92845 792 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 EPSTI1Q96J88 318 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 RUSC1Q9BVN2 902 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 TRAIPQ9BWF2 469 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 CERS4Q9HA82 394 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 POLD4Q9HCU8 107 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 AGPAT5Q9NUQ2 364 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 TMEM161AQ9NX61 479 aa23.97■■□□□ 1.43
NME3-210ENST00000567271 PIN4Q9Y237 131 aaKnown RBP23.97■■□□□ 1.43
NME3-210ENST00000567271 MYH15Q9Y2K3 1946 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 COL4A6Q14031 1691 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 ADGRA3Q8IWK6 1321 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 A0A0U1RQF3 1178 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 INO80B-WBP1J3KQ70 363 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 SPTLC2O15270 562 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 YEATS4O95619 227 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 PLA2G4BP0C869 781 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 HOXA11P31270 313 aaPredicted RBP23.96■■□□□ 1.43
NME3-210ENST00000567271 SLC12A3P55017 1021 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 ERVK-21P61565 698 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 MBTD1Q05BQ5 628 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 ATL3Q6DD88 541 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms