RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZBBXA8MT70 800 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 ACRP10323 421 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 DARSP14868 501 aaKnown RBP13.48□□□□□ -0.25
SF3B3-208ENST00000567250 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
SF3B3-208ENST00000567250 CMA1P23946 247 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 ARL2P36404 184 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 NAMPTP43490 491 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 DMP1Q13316 513 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-208ENST00000567250 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 ZBTB8OSQ8IWT0 167 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 PDILTQ8N807 584 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 RNF149Q8NC42 400 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-208ENST00000567250 RUSC1Q9BVN2 902 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 TNMDQ9H2S6 317 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 BLOC1S4Q9NUP1 217 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
SF3B3-208ENST00000567250 GLRA2P23416 452 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 CD52P31358 61 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 EPHB4P54760 987 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 AMPD3Q01432 767 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 CAPSQ13938 189 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
SF3B3-208ENST00000567250 MCM6Q14566 821 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 C1orf186Q6ZWK4 172 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 HERVK_113Q902F9 699 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
SF3B3-208ENST00000567250 DHX58Q96C10 678 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 CCDC34Q96HJ3 373 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 CHAMP1Q96JM3 812 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 NFKBIZQ9BYH8 718 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 GDPD2Q9HCC8 539 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 GPRC5CQ9NQ84 441 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 LARSQ9P2J5 1176 aaKnown RBP13.47□□□□□ -0.25
SF3B3-208ENST00000567250 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
SF3B3-208ENST00000567250 GBF1Q92538 1859 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 HIP1RO75146 1068 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 ERLIN2O94905 339 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 PFKFB1P16118 471 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
SF3B3-208ENST00000567250 NFX1Q12986 1120 aaKnown RBP13.46□□□□□ -0.25
SF3B3-208ENST00000567250 GPNMBQ14956 572 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-208ENST00000567250 KSR1Q8IVT5 923 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 CEP57L1Q8IYX8 460 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 TMEM40Q8WWA1 233 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 USP25Q9UHP3 1055 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
SF3B3-208ENST00000567250 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
SF3B3-208ENST00000567250 A0A087X0B3 334 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 H0YCG3 227 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 FAM13AO94988 1023 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 AMHP03971 560 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 SCP2P22307 547 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 ABCD1P33897 745 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 SYKP43405 635 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 EFNA5P52803 228 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 SMTNP53814 917 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 PTENP60484 403 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 SHHQ15465 462 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 E2F4Q16254 413 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 C9orf50Q5SZB4 431 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 CDCA2Q69YH5 1023 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 CATSPER4Q7RTX7 472 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 PANK2Q9BZ23 570 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 AGO3Q9H9G7 860 aaKnown RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 ST3GAL5Q9UNP4 418 aa13.45□□□□□ -0.26
SF3B3-208ENST00000567250 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-208ENST00000567250 SLC4A7Q9Y6M7 1214 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms