RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MYO1EQ12965 1108 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 GJB7Q6PEY0 223 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 GCNT4Q9P109 453 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.3
COMMD4-215ENST00000566843 TAF1LQ8IZX4 1826 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 EVI5O60447 810 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PHF2O75151 1096 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 MED24O75448 989 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 VIMP08670 466 aaKnown RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 ALAS1P13196 640 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 HSPA6P17066 643 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 SOX5P35711 763 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 FAM133BQ5BKY9 247 aaKnown RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PNMA8AQ86V59 439 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 AGAP11Q8TF27 550 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 TYW1Q9NV66 732 aaKnown RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PARP2Q9UGN5 583 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PCYOX1Q9UHG3 505 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PCDHA3Q9Y5H8 950 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PPP1R12AO14974 1030 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 UBOX5O94941 541 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 NR3C1P04150 777 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 COPB2P35606 906 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 PDE6CP51160 858 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 EP400NLQ6ZTU2 488 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 NLRP3Q96P20 1036 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 SEMA4AQ9H3S1 761 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 NOP53Q9NZM5 478 aaKnown RBP16.95■□□□□ 0.3
COMMD4-215ENST00000566843 KCNG1Q9UIX4 513 aa16.95■□□□□ 0.3
COMMD4-215ENST00000566843 ASTN1O14525 1302 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 RPL13P26373 211 aaKnown RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 CHRNA3P32297 505 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 HADHBP55084 474 aaKnown RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 PRPF4BQ13523 1007 aaKnown RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 AUHQ13825 339 aaKnown RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 SFR1Q86XK3 245 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 CTNNBL1Q8WYA6 563 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 MBOAT7Q96N66 472 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 STK33Q9BYT3 514 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 MTMR4Q9NYA4 1195 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 CYP3A7-CYP3A51PA0A087WV96 503 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 PODXLO00592 558 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 NEBLO76041 1014 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 CYP3A7P24462 503 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 BTDP43251 543 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 SYT2Q8N9I0 419 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 ALG3Q92685 438 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 ROPN1BQ9BZX4 212 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 ROPN1Q9HAT0 212 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 MTRF1LQ9UGC7 380 aaKnown RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 NARFQ9UHQ1 456 aa16.94■□□□□ 0.3
COMMD4-215ENST00000566843 USP15Q9Y4E8 981 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-215ENST00000566843 RIPK2O43353 540 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 CCND1P24385 295 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 CTNNA2P26232 953 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 RPL21P46778 160 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 CASP4P49662 377 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ALDH5A1P51649 535 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 KCNJ2P63252 427 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 BNIP1Q12981 228 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TCERG1LQ5VWI1 586 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TBC1D9BQ66K14 1250 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TAOK1Q7L7X3 1001 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 GBP7Q8N8V2 638 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ARHGEF26Q96DR7 871 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ECT2Q9H8V3 914 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 L3MBTL1Q9Y468 752 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 IGKV6D-41A0A0C4DH26 115 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 RARGP13631 454 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 RFC4P35249 363 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 GRIK3Q13003 919 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ZNF211Q13398 564 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TCEAL1Q15170 157 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ADAT2Q7Z6V5 191 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 ADGRF4Q8IZF3 695 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 PRELID2Q8N945 189 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 CNKSR1Q969H4 720 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 THOC1Q96FV9 657 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 MOV10L1Q9BXT6 1211 aaKnown RBP16.93■□□□□ 0.3
COMMD4-215ENST00000566843 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
COMMD4-215ENST00000566843 C10orf71Q711Q0 1435 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 POTEFA5A3E0 1075 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 RASGRF2O14827 1237 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms