RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GLRA2P23416 452 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 RRAGBQ5VZM2 374 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 CCDC73Q6ZRK6 1079 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 ASAP3Q8TDY4 903 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 LEO1Q8WVC0 666 aaPredicted RBP28.97■■■□□ 2.23
NME3-209ENST00000566600 RAD54LQ92698 747 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 IFT122Q9HBG6 1241 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 GPRC5CQ9NQ84 441 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 PCDHA7Q9UN72 937 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 MICAL3Q7RTP6 2002 aa28.97■■■□□ 2.23
NME3-209ENST00000566600 SLC12A3P55017 1021 aa28.96■■■□□ 2.23
NME3-209ENST00000566600 PPP2R5AQ15172 486 aa28.96■■■□□ 2.23
NME3-209ENST00000566600 PCBP1Q15365 356 aaKnown RBP eCLIP28.96■■■□□ 2.23
NME3-209ENST00000566600 AXDND1Q5T1B0 1012 aaPredicted RBP28.96■■■□□ 2.23
NME3-209ENST00000566600 C1orf186Q6ZWK4 172 aa28.96■■■□□ 2.23
NME3-209ENST00000566600 BLOC1S4Q9NUP1 217 aa28.96■■■□□ 2.23
NME3-209ENST00000566600 ENPP3O14638 875 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 GUCY2CP25092 1073 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 CAPSQ13938 189 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 IFNLR1Q8IU57 520 aaPredicted RBP28.95■■■□□ 2.22
NME3-209ENST00000566600 LARP4BQ92615 738 aaKnown RBP28.95■■■□□ 2.22
NME3-209ENST00000566600 IFT74Q96LB3 600 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 DRC1Q96MC2 740 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 RUSC1Q9BVN2 902 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 NFKBIZQ9BYH8 718 aa28.95■■■□□ 2.22
NME3-209ENST00000566600 TSPYL2Q9H2G4 693 aaPredicted RBP28.95■■■□□ 2.22
NME3-209ENST00000566600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.94■■■□□ 2.22
NME3-209ENST00000566600 ZSCAN20P17040 1043 aaPredicted RBP28.94■■■□□ 2.22
NME3-209ENST00000566600 PTENP60484 403 aa28.94■■■□□ 2.22
NME3-209ENST00000566600 DEFB103AP81534 67 aa28.94■■■□□ 2.22
NME3-209ENST00000566600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.94■■■□□ 2.22
NME3-209ENST00000566600 HERC6Q8IVU3 1022 aa28.94■■■□□ 2.22
NME3-209ENST00000566600 TMX1Q9H3N1 280 aa28.94■■■□□ 2.22
NME3-209ENST00000566600 RNF216Q9NWF9 866 aaPredicted RBP28.94■■■□□ 2.22
NME3-209ENST00000566600 DENND3A2RUS2 1198 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 RAB30Q15771 203 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 SHC4Q6S5L8 630 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 CATSPER4Q7RTX7 472 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 MYOCDQ8IZQ8 938 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 C17orf75Q9HAS0 396 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 CHST12Q9NRB3 414 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 C1orf112Q9NSG2 853 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 FAM13BQ9NYF5 915 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 KCNG1Q9UIX4 513 aa28.93■■■□□ 2.22
NME3-209ENST00000566600 LRRIQ4A6NIV6 560 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 HIP1RO75146 1068 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 STAT6P42226 847 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 NAMPTP43490 491 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 MCM6Q14566 821 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 FAM109BQ6ICB4 259 aaPredicted RBP28.92■■■□□ 2.22
NME3-209ENST00000566600 GPBP1Q86WP2 473 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 ADAM2Q99965 735 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 C2orf40Q9H1Z8 148 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 RGS18Q9NS28 235 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 MSRAQ9UJ68 235 aa28.92■■■□□ 2.22
NME3-209ENST00000566600 GRXCR1A8MXD5 290 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 CSDE1O75534 798 aaKnown RBP28.91■■■□□ 2.22
NME3-209ENST00000566600 DHX8Q14562 1220 aaKnown RBP28.91■■■□□ 2.22
NME3-209ENST00000566600 ZBTB8OSQ8IWT0 167 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 LRRC15Q8TF66 581 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 TOP1MTQ969P6 601 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 ZBED2Q9BTP6 218 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 RBM19Q9Y4C8 960 aaKnown RBP28.91■■■□□ 2.22
NME3-209ENST00000566600 PCDHA11Q9Y5I1 949 aa28.91■■■□□ 2.22
NME3-209ENST00000566600 SOX1O00570 391 aaPredicted RBP28.9■■■□□ 2.22
NME3-209ENST00000566600 GJB5O95377 273 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 FGFR4P22455 802 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 NCBP1Q09161 790 aaKnown RBP28.9■■■□□ 2.22
NME3-209ENST00000566600 DSC3Q14574 896 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 RESP18Q5W5W9 173 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 ADALQ6DHV7 355 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 SV2BQ7L1I2 683 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 RTN4RL1Q86UN2 441 aaPredicted RBP28.9■■■□□ 2.22
NME3-209ENST00000566600 DEPTORQ8TB45 409 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 LINC01599Q8WXQ3 324 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 CHAMP1Q96JM3 812 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 PYM1Q9BRP8 204 aaKnown RBP28.9■■■□□ 2.22
NME3-209ENST00000566600 PANK2Q9BZ23 570 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 MINDY3Q9H8M7 445 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 DACT1Q9NYF0 836 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 CHMP5Q9NZZ3 219 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 ODF2LQ9ULJ1 636 aa28.9■■■□□ 2.22
NME3-209ENST00000566600 INO80B-WBP1J3KQ70 363 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 ERLIN2O94905 339 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 KRT18P05783 430 aaKnown RBP28.89■■■□□ 2.22
NME3-209ENST00000566600 ARSHQ5FYA8 562 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 CDCA2Q69YH5 1023 aaPredicted RBP28.89■■■□□ 2.22
NME3-209ENST00000566600 GPR153Q6NV75 609 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 SLC24A5Q71RS6 500 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 PDILTQ8N807 584 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 BSNDQ8WZ55 320 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 CUEDC2Q9H467 287 aa28.89■■■□□ 2.22
NME3-209ENST00000566600 TCHHQ07283 1943 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 RBAK-RBAKDNI3L0D1 243 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 MGEA5O60502 916 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 STAG3L1P0CL83 205 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 FXR1P51114 621 aaKnown RBP eCLIP28.88■■■□□ 2.21
NME3-209ENST00000566600 EFNA5P52803 228 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 MBTD1Q05BQ5 628 aa28.88■■■□□ 2.21
NME3-209ENST00000566600 MAPK7Q13164 816 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms