RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZDHHC15Q96MV8 337 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 WDR18Q9BV38 432 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 APEX2Q9UBZ4 518 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 SLC12A6Q9UHW9 1150 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 DAAM1Q9Y4D1 1078 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
CDH1-209ENST00000566510 EIF3DO15371 548 aaKnown RBP eCLIP15.42■□□□□ 0.06
CDH1-209ENST00000566510 ATP2C2O75185 946 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 CCDC172P0C7W6 258 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 SF3A3Q12874 501 aaKnown RBP eCLIP15.42■□□□□ 0.06
CDH1-209ENST00000566510 QPCTQ16769 361 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 KCNV1Q6PIU1 500 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 ZNF720Q7Z2F6 126 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 ERVK-5Q9HDB9 667 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 AGPAT3Q9NRZ7 376 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 GOLGA6L7A0A1B0GV03 622 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 FOXN3O00409 490 aaPredicted RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 TOM1O60784 492 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 RBM26Q5T8P6 1007 aaKnown RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 CPLX4Q7Z7G2 160 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 CTTNBP2NLQ9P2B4 639 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
CDH1-209ENST00000566510 SNX24Q9Y343 169 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
CDH1-209ENST00000566510 IGLV3-22A0A075B6J6 115 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 DDX39AO00148 427 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 TRAPPC3O43617 180 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 FSBPO95073 299 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 JAG1P78504 1218 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 PHLDB3Q6NSJ2 640 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 STXBP4Q6ZWJ1 553 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 SUGP1Q8IWZ8 645 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 CNPY4Q8N129 248 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 NAP1L3Q99457 506 aaPredicted RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 PSMD1Q99460 953 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 COG5Q9UP83 839 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 ATXN2Q99700 1313 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 GUCY2CP25092 1073 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 FNTAP49354 379 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 PTENP60484 403 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 BANK1Q8NDB2 785 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 UHMK1Q8TAS1 419 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 SLC20A1Q8WUM9 679 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 ZNF622Q969S3 477 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDH1-209ENST00000566510 GPR88Q9GZN0 384 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 TDRD3Q9H7E2 651 aaKnown RBP15.41■□□□□ 0.06
CDH1-209ENST00000566510 TUFT1Q9NNX1 390 aa15.41■□□□□ 0.06
CDH1-209ENST00000566510 CAND2O75155 1236 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 PPATQ06203 517 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 AGBL2Q5U5Z8 902 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ZNF746Q6NUN9 644 aaPredicted RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 ALG3Q92685 438 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 C18orf8Q96DM3 657 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ERP44Q9BS26 406 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 WRAP73Q9P2S5 460 aaPredicted RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 NCANO14594 1321 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ANKRD62A6NC57 917 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 SHBGP04278 402 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ECE1P42892 770 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 STAT2P52630 851 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 POU5F1Q01860 360 aaKnown RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 CCDC114Q96M63 670 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ZNF577Q9BSK1 485 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 CARD9Q9H257 536 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 KLRG2A4D1S0 409 aaPredicted RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 BHMG1C9JSJ3 638 aaPredicted RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 PSMD10O75832 226 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 FTLP02792 175 aaPredicted RBP15.4■□□□□ 0.06
CDH1-209ENST00000566510 CDR1P51861 262 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 PRELPP51888 382 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 DLG4P78352 724 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 BFSP1Q12934 665 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 SEC14L1Q92503 715 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 SEC16BQ96JE7 1060 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 NACC1Q96RE7 527 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 AGPAT1Q99943 283 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 SELENOSQ9BQE4 189 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 PAGR1Q9BTK6 254 aa15.4■□□□□ 0.06
CDH1-209ENST00000566510 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms