RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 PSMC2P35998 433 aaKnown RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 DLG4P78352 724 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ZBED6P86452 979 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 NFIL3Q16649 462 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 DPY19L2P1Q6NXN4 242 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 SLC39A4Q6P5W5 647 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 MCPH1Q8NEM0 835 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 SCFD2Q8WU76 684 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 BAP1Q92560 729 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 NUP58Q9BVL2 599 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 NAA15Q9BXJ9 866 aaKnown RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 LRRC53A6NM62 1247 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ZBTB42B2RXF5 422 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 SLC16A3O15427 465 aaKnown RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ADCY6O43306 1168 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 CNGA1P29973 690 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 SMTNP53814 917 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ARHGAP1Q07960 439 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TTLL4Q14679 1199 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 PLEKHH3Q7Z736 793 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ABRAQ8N0Z2 381 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
LINC00562-201ENST00000566385 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 TFR2Q9UP52 801 aa12.43□□□□□ -0.42
LINC00562-201ENST00000566385 ADGRA2Q96PE1 1338 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 FAM155AB1AL88 458 aaPredicted RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 AFPP02771 609 aaKnown RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 GLRA2P23416 452 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 GRM1Q13255 1194 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 MEA1Q16626 185 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 CBWD6Q4V339 395 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 CBWD3Q5JTY5 395 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 CBWD5Q5RIA9 395 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 CYP26C1Q6V0L0 522 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 RRAGAQ7L523 313 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 TMTC1Q8IUR5 882 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 MAP4K3Q8IVH8 894 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 SLC7A3Q8WY07 619 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 RNPEPQ9H4A4 650 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 DIS3Q9Y2L1 958 aaKnown RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 A0A1W2PQJ5 194 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 LRRN2O75325 713 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 LGR5O75473 907 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 EDN1P05305 212 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 POLR2FP61218 127 aaKnown RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 PRAMEF19Q5SWL8 479 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 FAM160B1Q5W0V3 765 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 NEK11Q8NG66 645 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 PLEKHO2Q8TD55 490 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 SPIRE2Q8WWL2 714 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 METTL14Q9HCE5 456 aaKnown RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 HSPBP1Q9NZL4 362 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 PLAGL2Q9UPG8 496 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 FRMD4BQ9Y2L6 1034 aa12.42□□□□□ -0.42
LINC00562-201ENST00000566385 REXO2Q9Y3B8 237 aaKnown RBP12.42□□□□□ -0.42
LINC00562-201ENST00000566385 GJB1P08034 283 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 PON1P27169 355 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 ARL2P36404 184 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 ALCAMQ13740 583 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 PLCB4Q15147 1175 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 LRRC71Q8N4P6 559 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 LZTFL1Q9NQ48 299 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 FLRT1Q9NZU1 646 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 ARHGAP20Q9P2F6 1191 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 ARHGAP28Q9P2N2 729 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 AJAP1Q9UKB5 411 aaPredicted RBP12.41□□□□□ -0.42
LINC00562-201ENST00000566385 EVPLQ92817 2033 aa12.41□□□□□ -0.42
LINC00562-201ENST00000566385 MANSC4A6NHS7 340 aaPredicted RBP12.4□□□□□ -0.42
LINC00562-201ENST00000566385 SLC10A3P09131 477 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 MAPK4P31152 587 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 CBWD2Q8IUF1 395 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 AFG1LQ8WV93 481 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 ZNF668Q96K58 619 aaPredicted RBP12.4□□□□□ -0.42
LINC00562-201ENST00000566385 MKNK1Q9BUB5 465 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
LINC00562-201ENST00000566385 EPN1Q9Y6I3 576 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms