RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
CMTM3-212ENST00000566121 MBTPS2O43462 519 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 COL9A1P20849 921 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 KRT2P35908 639 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 GATMP50440 423 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 RAB27AP51159 221 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 DRP2Q13474 957 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 KCNC3Q14003 757 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 MTERF2Q49AM1 385 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 LRRC55Q6ZSA7 311 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 OXER1Q8TDS5 423 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 SLC7A3Q8WY07 619 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
CMTM3-212ENST00000566121 EPHX3Q9H6B9 360 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 STK39Q9UEW8 545 aa17■□□□□ 0.31
CMTM3-212ENST00000566121 ATF7P17544 494 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 IRS1P35568 1242 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 PHKA2P46019 1235 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 DLX2Q07687 328 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 TMEM31Q5JXX7 168 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 TRMT1LQ7Z2T5 733 aaKnown RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 SRGAP1Q7Z6B7 1085 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
CMTM3-212ENST00000566121 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 CLEC1BQ9P126 229 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 ATG2AQ2TAZ0 1938 aa16.99■□□□□ 0.31
CMTM3-212ENST00000566121 A0A087WZ62 844 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 TBX10O75333 385 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 SLITRK3O94933 977 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 FGFR1P11362 822 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 NEK4P51957 841 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 KRT17Q04695 432 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 DUSP6Q16828 381 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 EARS2Q5JPH6 523 aaKnown RBP16.98■□□□□ 0.31
CMTM3-212ENST00000566121 CLLU1OSQ5K130 101 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 MRPL10Q7Z7H8 261 aaKnown RBP16.98■□□□□ 0.31
CMTM3-212ENST00000566121 ABI1Q8IZP0 508 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 ZNF558Q96NG5 402 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 MTMR9Q96QG7 549 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-212ENST00000566121 LRFN3Q9BTN0 628 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 SPG21Q9NZD8 308 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 PCDHA12Q9UN75 941 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 KIAA1671Q9BY89 1806 aa16.98■□□□□ 0.31
CMTM3-212ENST00000566121 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
CMTM3-212ENST00000566121 ERVFC1P60507 584 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 NR5A1Q13285 461 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
CMTM3-212ENST00000566121 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 RHPN2Q8IUC4 686 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 THNSL1Q8IYQ7 743 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
CMTM3-212ENST00000566121 KHSRPQ92945 711 aaKnown RBP eCLIP16.97■□□□□ 0.31
CMTM3-212ENST00000566121 CEP170P1Q96L14 293 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 LXNQ9BS40 222 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 NFKBIZQ9BYH8 718 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 TLE6Q9H808 572 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 WRAP73Q9P2S5 460 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-212ENST00000566121 IRAK3Q9Y616 596 aa16.97■□□□□ 0.31
CMTM3-212ENST00000566121 PRR33A8MZF0 331 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-212ENST00000566121 AXLP30530 894 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 NRIP1P48552 1158 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 MXD4Q14582 209 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-212ENST00000566121 CBX2Q14781 532 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-212ENST00000566121 ADGRD2Q7Z7M1 963 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 SLC39A11Q8N1S5 342 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 CNNM3Q8NE01 707 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 PRPF31Q8WWY3 499 aaKnown RBP16.96■□□□□ 0.31
CMTM3-212ENST00000566121 PGBD4Q96DM1 585 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 SCLT1Q96NL6 688 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
CMTM3-212ENST00000566121 TMEM150BA6NC51 233 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 INPPL1O15357 1258 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 MARCH6O60337 910 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 GLP2RO95838 553 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.3
CMTM3-212ENST00000566121 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
CMTM3-212ENST00000566121 NDUFV1P49821 464 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 POLGP54098 1239 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-212ENST00000566121 NPEPPSP55786 919 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 GIT2Q14161 759 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 HERC4Q5GLZ8 1057 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-212ENST00000566121 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 DIS3L2Q8IYB7 885 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms