RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 GUCY2CP25092 1073 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 AXLP30530 894 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 EFNA5P52803 228 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 PTENP60484 403 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 RAB30Q15771 203 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 ADALQ6DHV7 355 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 RAD54LQ92698 747 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 NLRP4Q96MN2 994 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 IFT122Q9HBG6 1241 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 MSRAQ9UJ68 235 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 PCDHA7Q9UN72 937 aa13.95□□□□□ -0.18
SHCBP1-204ENST00000565887 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 STAG3L1P0CL83 205 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 PLCG1P19174 1290 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 ABCD1P33897 745 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 NAMPTP43490 491 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SMTNP53814 917 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 AMPD3Q01432 767 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SPECC1Q5M775 1068 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 AXDND1Q5T1B0 1012 aaPredicted RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SLC24A5Q71RS6 500 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 ZBTB8OSQ8IWT0 167 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 IQUBQ8NA54 791 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 LARP4BQ92615 738 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 TOP1MTQ969P6 601 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 PLIN2Q99541 437 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 CXXC1Q9P0U4 656 aaPredicted RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 LARSQ9P2J5 1176 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 ODF2LQ9ULJ1 636 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 PCDHA11Q9Y5I1 949 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
SHCBP1-204ENST00000565887 H0YCG3 227 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 GLRA2P23416 452 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 CMA1P23946 247 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 STAT6P42226 847 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 MAEAQ7L5Y9 396 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 CATSPER4Q7RTX7 472 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 KCNK18Q7Z418 384 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 KSR1Q8IVT5 923 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 HERC6Q8IVU3 1022 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 SLC17A8Q8NDX2 589 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 PPP1R16BQ96T49 567 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 RAD9AQ99638 391 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 NTPCRQ9BSD7 190 aaKnown RBP13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 TRAIPQ9BWF2 469 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 BLOC1S4Q9NUP1 217 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 INSL6Q9Y581 213 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
SHCBP1-204ENST00000565887 TMEM265A0A087WTH1 108 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 ERLIN2O94905 339 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 KRT18P05783 430 aaKnown RBP13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 FAM189BP81408 668 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 DMP1Q13316 513 aaPredicted RBP13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 FAM109BQ6ICB4 259 aaPredicted RBP13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 MYOCDQ8IZQ8 938 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 ADAM2Q99965 735 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 OSBPL7Q9BZF2 842 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 ELAC1Q9H777 363 aaKnown RBP13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 PCDH10Q9P2E7 1040 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 ARID2Q68CP9 1835 aa13.92□□□□□ -0.18
SHCBP1-204ENST00000565887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 INO80B-WBP1J3KQ70 363 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 HIP1RO75146 1068 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 GJB5O95377 273 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 EOMESO95936 686 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 PLS3P13797 630 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 CAPSQ13938 189 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms