RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SPG21Q9NZD8 308 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 PUF60Q9UHX1 559 aaKnown RBP9.66□□□□□ -0.86
CAPN3-213ENST00000565173 TECTAO75443 2155 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 PIEZO1Q92508 2521 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF318Q5VUA4 2279 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 FSD2A1L4K1 749 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 SLC37A4O43826 429 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 PHKA2P46019 1235 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 ZXDAP98168 799 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 CDC42EP1Q00587 391 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 KRT17Q04695 432 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 STK3Q13188 491 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 MTERF2Q49AM1 385 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 TRIM67Q6ZTA4 783 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 BMP8AQ7Z5Y6 402 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 KSR1Q8IVT5 923 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 FAM177A1Q8N128 213 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 RNF169Q8NCN4 708 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 HELQQ8TDG4 1101 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 PHF20Q9BVI0 1012 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 GCOM2Q9BZD3 368 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 KCNH6Q9H252 994 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 SEPT9Q9UHD8 586 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 DDX25Q9UHL0 483 aaKnown RBP9.65□□□□□ -0.86
CAPN3-213ENST00000565173 VAV3Q9UKW4 847 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 KCNJ14Q9UNX9 436 aa9.65□□□□□ -0.86
CAPN3-213ENST00000565173 A0A087WZ62 844 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 MEIS3P2A8K0S8 358 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 NT5C1B-RDH14C9J2C7 533 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 CPLX1O14810 134 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 DTNBO60941 627 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 ZNF623O75123 536 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 PPM1AP35813 382 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 TECP42680 631 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 DNM2P50570 870 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 BCAR1P56945 870 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 NHLH1Q02575 133 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 SCRN1Q12765 414 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 NONOQ15233 471 aaKnown RBP eCLIP9.64□□□□□ -0.87
CAPN3-213ENST00000565173 INF2Q27J81 1249 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 PPP4R3AQ6IN85 833 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 ALYREFQ86V81 257 aaKnown RBP9.64□□□□□ -0.87
CAPN3-213ENST00000565173 TMEM173Q86WV6 379 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-213ENST00000565173 RHPN2Q8IUC4 686 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 HAS1Q92839 578 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-213ENST00000565173 IFT122Q9HBG6 1241 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 ENTPD7Q9NQZ7 604 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 CYP26B1Q9NR63 512 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 GJB4Q9NTQ9 266 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 DACT1Q9NYF0 836 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-213ENST00000565173 CDH22Q9UJ99 828 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 HCFC2Q9Y5Z7 792 aa9.64□□□□□ -0.87
CAPN3-213ENST00000565173 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 M0R296 226 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 OFD1O75665 1012 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 CTDNEP1O95476 244 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 HOXB8P17481 243 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 QARSP47897 775 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 ALDH7A1P49419 539 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 NPEPPSP55786 919 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 PSMC5P62195 406 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 SMC1AQ14683 1233 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 LETM2Q2VYF4 491 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 EARS2Q5JPH6 523 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 IER5LQ5T953 404 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 PLA2G4FQ68DD2 849 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 ZNF410Q86VK4 478 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 BCL7CQ8WUZ0 217 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 LPPQ93052 612 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 ASIC4Q96FT7 647 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 FAM20AQ96MK3 541 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 SCLT1Q96NL6 688 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 APOL5Q9BWW9 433 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 MRPL9Q9BYD2 267 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 DHX33Q9H6R0 707 aaKnown RBP9.63□□□□□ -0.87
CAPN3-213ENST00000565173 NRDE2Q9H7Z3 1164 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 FAM105AQ9NUU6 356 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 TPCN1Q9ULQ1 816 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 VPS13AQ96RL7 3174 aa9.63□□□□□ -0.87
CAPN3-213ENST00000565173 B4GALT3O60512 393 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 PFKFB2O60825 505 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 CXCL14O95715 111 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 486.8 ms