RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 MAMDC2Q7Z304 686 aaPredicted RBP6.18□□□□□ -1.42
CHD9-214ENST00000565119 SMC5Q8IY18 1101 aa6.18□□□□□ -1.42
CHD9-214ENST00000565119 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
CHD9-214ENST00000565119 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
CHD9-214ENST00000565119 GCDHQ92947 438 aaPredicted RBP6.18□□□□□ -1.42
CHD9-214ENST00000565119 UBA5Q9GZZ9 404 aa6.18□□□□□ -1.42
CHD9-214ENST00000565119 MAGEL2Q9UJ55 1249 aa6.18□□□□□ -1.42
CHD9-214ENST00000565119 A0A0U1RQG5 324 aaPredicted RBP6.17□□□□□ -1.42
CHD9-214ENST00000565119 TLDC2A0PJX2 215 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 GOLGA8BA8MQT2 603 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 ZNF185O15231 689 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 CENPBP07199 599 aaPredicted RBP6.17□□□□□ -1.42
CHD9-214ENST00000565119 APEX1P27695 318 aaKnown RBP6.17□□□□□ -1.42
CHD9-214ENST00000565119 SESN2P58004 480 aaPredicted RBP6.17□□□□□ -1.42
CHD9-214ENST00000565119 TCIRG1Q13488 830 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 EGFLAMQ63HQ2 1017 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 MICALCLQ6ZW33 695 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 C16orf59Q7L2K0 433 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 GPATCH3Q96I76 525 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 GBP4Q96PP9 640 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 BRINP2Q9C0B6 783 aa6.17□□□□□ -1.42
CHD9-214ENST00000565119 RASSF10A6NK89 507 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 MFAP3LO75121 409 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 EIF3JO75822 258 aaKnown RBP6.16□□□□□ -1.42
CHD9-214ENST00000565119 ZEB1P37275 1124 aaPredicted RBP6.16□□□□□ -1.42
CHD9-214ENST00000565119 MAP3K12Q12852 859 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 HIPK4Q8NE63 616 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 ZNF768Q9H5H4 540 aaKnown RBP6.16□□□□□ -1.42
CHD9-214ENST00000565119 RSAD1Q9HA92 442 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 PCDHA8Q9Y5H6 950 aa6.16□□□□□ -1.42
CHD9-214ENST00000565119 LPXNO60711 386 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 SSBP05455 408 aaKnown RBP eCLIP6.15□□□□□ -1.42
CHD9-214ENST00000565119 TYRP1P17643 537 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 PTH2RP49190 550 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 RALBP1Q15311 655 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 CRY1Q16526 586 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 FSTL4Q6MZW2 842 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 MFSD5Q6N075 450 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 GFM2Q969S9 779 aaKnown RBP6.15□□□□□ -1.42
CHD9-214ENST00000565119 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
CHD9-214ENST00000565119 NAP1L5Q96NT1 182 aaPredicted RBP6.15□□□□□ -1.42
CHD9-214ENST00000565119 KLHL42Q9P2K6 505 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 TESQ9UGI8 421 aaKnown RBP6.15□□□□□ -1.42
CHD9-214ENST00000565119 DENND2AQ9ULE3 1009 aa6.15□□□□□ -1.42
CHD9-214ENST00000565119 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.15□□□□□ -1.42
CHD9-214ENST00000565119 IPO13O94829 963 aaKnown RBP6.14□□□□□ -1.43
CHD9-214ENST00000565119 IGBP1P78318 339 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 PTPROQ16827 1216 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 MTDHQ86UE4 582 aaKnown RBP6.14□□□□□ -1.43
CHD9-214ENST00000565119 SERHL2Q9H4I8 314 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 TERF2IPQ9NYB0 399 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 SAE1Q9UBE0 346 aaPredicted RBP6.14□□□□□ -1.43
CHD9-214ENST00000565119 FRMD4BQ9Y2L6 1034 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 LAS1LQ9Y4W2 734 aaKnown RBP6.14□□□□□ -1.43
CHD9-214ENST00000565119 ASB1Q9Y576 335 aa6.14□□□□□ -1.43
CHD9-214ENST00000565119 CCDC194A0A1B0GVG4 234 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 GOLGA6L22H0YM25 854 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ARVCFO00192 962 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 FOXP2O15409 715 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 SCAF4O95104 1147 aaKnown RBP6.13□□□□□ -1.43
CHD9-214ENST00000565119 SRGAP2CP0DJJ0 459 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 LAG3P18627 525 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ERCC5P28715 1186 aaPredicted RBP6.13□□□□□ -1.43
CHD9-214ENST00000565119 USP14P54578 494 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ANTXR2P58335 489 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 SDE2Q6IQ49 451 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 APBB1IPQ7Z5R6 666 aaPredicted RBP6.13□□□□□ -1.43
CHD9-214ENST00000565119 NOSTRINQ8IVI9 506 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 TMTC2Q8N394 836 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 CELF2-AS1Q8N7Q2 184 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 FAM98AQ8NCA5 519 aaKnown RBP6.13□□□□□ -1.43
CHD9-214ENST00000565119 CALML6Q8TD86 181 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ARMC5Q96C12 935 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 CCDC136Q96JN2 1154 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 DNAJC2Q99543 621 aaKnown RBP6.13□□□□□ -1.43
CHD9-214ENST00000565119 TGIF2Q9GZN2 237 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ST7Q9NRC1 585 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 SYBUQ9NX95 663 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 ANKFY1Q9P2R3 1169 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 RCAN3Q9UKA8 241 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 TBX22Q9Y458 520 aa6.13□□□□□ -1.43
CHD9-214ENST00000565119 hCG_2014768A0A024R1R8 64 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 TRAV20A0A0B4J274 112 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 SCDO00767 359 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 AQP7O14520 342 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 PARNO95453 639 aaKnown RBP6.12□□□□□ -1.43
CHD9-214ENST00000565119 MAP4K4O95819 1239 aaPredicted RBP6.12□□□□□ -1.43
CHD9-214ENST00000565119 LACTBP83111 547 aaPredicted RBP6.12□□□□□ -1.43
CHD9-214ENST00000565119 PRR16Q569H4 304 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 GPATCH11Q8N954 259 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 ST8SIA2Q92186 375 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 NKD2Q969F2 451 aaPredicted RBP6.12□□□□□ -1.43
CHD9-214ENST00000565119 MYEOVQ96EZ4 313 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 WDR11Q9BZH6 1224 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 INSL6Q9Y581 213 aa6.12□□□□□ -1.43
CHD9-214ENST00000565119 CCDC66A2RUB6 948 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms