RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 STK4Q13043 487 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 PSMD2Q13200 908 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 STIM1Q13586 685 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 ZNF484Q5JVG2 852 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 DAW1Q8N136 415 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 MYCT1Q8N699 235 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 KIAA0895Q8NCT3 520 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
SF3B3-205ENST00000564899 CBX8Q9HC52 389 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 SLC39A2Q9NP94 309 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 GPRC5CQ9NQ84 441 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 XPNPEP1Q9NQW7 623 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 SEL1LQ9UBV2 794 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-205ENST00000564899 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-205ENST00000564899 ZBTB42B2RXF5 422 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 MAFO75444 373 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-205ENST00000564899 COL1A2P08123 1366 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 PLS3P13797 630 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 INSRRP14616 1297 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
SF3B3-205ENST00000564899 PPP1R2P41236 205 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 PSEN2P49810 448 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 IGBP1P78318 339 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 NKX3-2P78367 333 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 MFSD10Q14728 455 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 KLHL10Q6JEL2 608 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 LOXHD1Q8IVV2 1947 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 EXOC8Q8IYI6 725 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 KAT2BQ92831 832 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 KIFAP3Q92845 792 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 JPH2Q9BR39 696 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-205ENST00000564899 KATNAL1Q9BW62 490 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 OLFML3Q9NRN5 406 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 MAPK8IP1Q9UQF2 711 aa12.24□□□□□ -0.45
SF3B3-205ENST00000564899 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 PSMA7O14818 248 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 ACRP10323 421 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 PRCPP42785 496 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 PURAQ00577 322 aaKnown RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 GRIK4Q16099 956 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 COBLL1Q53SF7 1204 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 CT47A1Q5JQC4 288 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 RASIP1Q5U651 963 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 GLIS3Q8NEA6 775 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 TMEM143Q96AN5 459 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 UHRF1Q96T88 793 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 BPIFA3Q9BQP9 254 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 MTG1Q9BT17 334 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 POLR3FQ9H1D9 316 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 MRPL44Q9H9J2 332 aaKnown RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
SF3B3-205ENST00000564899 CTNND2Q9UQB3 1225 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 PCDHA2Q9Y5H9 948 aa12.23□□□□□ -0.45
SF3B3-205ENST00000564899 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 BECN2A8MW95 431 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 K7ENM7 598 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 HAS3O00219 553 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 GCNT3O95395 438 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 C22orf31O95567 290 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 SMIM10L2AP0DMW4 78 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 SMIM10L2BP0DMW5 78 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 MYBP10242 640 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 CSF2RAP15509 400 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 CST5P28325 142 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 ACLYP53396 1101 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 MYL5Q02045 173 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 TFF2Q03403 129 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 PAK1Q13153 545 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 CCSAPQ6IQ19 270 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-205ENST00000564899 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 RNF180Q86T96 592 aa12.22□□□□□ -0.45
SF3B3-205ENST00000564899 LUZP1Q86V48 1076 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms