RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.22■□□□□ 0.03
CNOT1-206ENST00000564557 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
CNOT1-206ENST00000564557 RWDD3Q9Y3V2 267 aa15.22■□□□□ 0.03
CNOT1-206ENST00000564557 ARHGEF35A5YM69 484 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 MED24O75448 989 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 DGKIO75912 1065 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 ARHGEF15O94989 841 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 MUTP22033 750 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 PRPHP41219 470 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
CNOT1-206ENST00000564557 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 MXD4Q14582 209 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-206ENST00000564557 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-206ENST00000564557 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 C4orf32Q8N8J7 132 aa15.21■□□□□ 0.03
CNOT1-206ENST00000564557 TTC3P53804 2025 aa15.21■□□□□ 0.02
CNOT1-206ENST00000564557 ADGRA3Q8IWK6 1321 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 A0A087WWV3 80 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 HOXA2O43364 376 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 MGEA5O60502 916 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 USO1O60763 962 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 CSDE1O75534 798 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 BMP15O95972 392 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 SPATA31C1P0DKV0 1188 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 FGFR4P22455 802 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 PHKA2P46019 1235 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 RARRES1P49788 294 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 PAN2Q504Q3 1202 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 TMEM192Q8IY95 271 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 ABI1Q8IZP0 508 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 RNF149Q8NC42 400 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 SNX29Q8TEQ0 813 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 CHST12Q9NRB3 414 aa15.2■□□□□ 0.02
CNOT1-206ENST00000564557 DBR1Q9UK59 544 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 LAMA2P24043 3122 aaKnown RBP15.2■□□□□ 0.02
CNOT1-206ENST00000564557 C9IYK1 514 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 CTNNB1P35222 781 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 GRB10Q13322 594 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 GPM6BQ13491 265 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
CNOT1-206ENST00000564557 PTPROQ16827 1216 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 TWF2Q6IBS0 349 aaKnown RBP15.19■□□□□ 0.02
CNOT1-206ENST00000564557 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 MAEAQ7L5Y9 396 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 CMTR2Q8IYT2 770 aaKnown RBP15.19■□□□□ 0.02
CNOT1-206ENST00000564557 MCPH1Q8NEM0 835 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 GDPD5Q8WTR4 605 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 SNX21Q969T3 373 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 CDK5RAP3Q96JB5 506 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
CNOT1-206ENST00000564557 TMEM161AQ9NX61 479 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 KIAA1024Q9UPX6 916 aa15.19■□□□□ 0.02
CNOT1-206ENST00000564557 PIN4Q9Y237 131 aaKnown RBP15.19■□□□□ 0.02
CNOT1-206ENST00000564557 EPOPA6NHQ4 379 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 TBKBP1A7MCY6 615 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 ERLIN2O94905 339 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 RB1P06400 928 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 SKIP12755 728 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 ATP2C1P98194 919 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-206ENST00000564557 DSC3Q14574 896 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
CNOT1-206ENST00000564557 SPRED2Q7Z698 418 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 ZNF689Q96CS4 500 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-206ENST00000564557 POLR3FQ9H1D9 316 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-206ENST00000564557 AAASQ9NRG9 546 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 LMCD1Q9NZU5 365 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 DNM3Q9UQ16 869 aa15.18■□□□□ 0.02
CNOT1-206ENST00000564557 VWA3AA6NCI4 1184 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 INO80B-WBP1J3KQ70 363 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 EOMESO95936 686 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 SYT1P21579 422 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 BMPR1AP36894 532 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 FAM189BP81408 668 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 PCBP1Q15365 356 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNOT1-206ENST00000564557 PADI6Q6TGC4 694 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 C11orf84Q9BUA3 381 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-206ENST00000564557 IFT122Q9HBG6 1241 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 XPNPEP1Q9NQW7 623 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
CNOT1-206ENST00000564557 MTCH2Q9Y6C9 303 aa15.17■□□□□ 0.02
CNOT1-206ENST00000564557 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 H3BNC9 293 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 POU3F3P20264 500 aaPredicted RBP15.16■□□□□ 0.02
CNOT1-206ENST00000564557 RAB27AP51159 221 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNOT1-206ENST00000564557 ZBTB8OSQ8IWT0 167 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 RASSF8Q8NHQ8 419 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms