RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TMEM176AQ96HP8 235 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 RPL10LQ96L21 214 aaKnown RBP6.9□□□□□ -1.3
UBR1-205ENST00000564540 ADOQ96SZ5 270 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 PLA2G3Q9NZ20 509 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 A0A0A6YYK5 440 aaPredicted RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 MUSKO15146 869 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 ACO1P21399 889 aaKnown RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 MSX2P35548 267 aaPredicted RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 RPS19P39019 145 aaKnown RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 ID4P47928 161 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 BPIFB4P59827 614 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 PHC1P78364 1004 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 TCIRG1Q13488 830 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 RIN1Q13671 783 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 DDB1Q16531 1140 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 HS1BP3Q53T59 392 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 SPDYAQ5MJ70 313 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 GPR158Q5T848 1215 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 BROXQ5VW32 411 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 Q6ZSN1 163 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 STRA8Q7Z7C7 330 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 CLEC14AQ86T13 490 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 ANKRD53Q8N9V6 530 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 SLC7A6OSQ96CW6 309 aaPredicted RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 CDK5RAP1Q96SZ6 601 aaKnown RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 NOL10Q9BSC4 688 aaKnown RBP6.89□□□□□ -1.31
UBR1-205ENST00000564540 SOX7Q9BT81 388 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 SLC6A15Q9H2J7 730 aa6.89□□□□□ -1.31
UBR1-205ENST00000564540 MYPNQ86TC9 1320 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 NEMP1O14524 444 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 MATN3O15232 486 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 IGSF3O75054 1194 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 LSP1P33241 339 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 GRM7Q14831 915 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 TAF7LQ5H9L4 462 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 ESPNLQ6ZVH7 1005 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 POLNQ7Z5Q5 900 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 RABGGTAQ92696 567 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 USP7Q93009 1102 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 LPPQ93052 612 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 GPHA2Q96T91 129 aa6.88□□□□□ -1.31
UBR1-205ENST00000564540 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
UBR1-205ENST00000564540 USP36Q9P275 1121 aaKnown RBP6.88□□□□□ -1.31
UBR1-205ENST00000564540 SUV39H1O43463 412 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 TOX4O94842 621 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 BPIP17213 487 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 ADAM8P78325 824 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 STRN3Q13033 797 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 DHCR24Q15392 516 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 ATP13A4Q4VNC1 1196 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 DDX46Q7L014 1031 aaKnown RBP6.87□□□□□ -1.31
UBR1-205ENST00000564540 ZNF808Q8N4W9 903 aaPredicted RBP6.87□□□□□ -1.31
UBR1-205ENST00000564540 PLA2G15Q8NCC3 412 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 SLC5A5Q92911 643 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 NELFAQ9H3P2 528 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
UBR1-205ENST00000564540 A0A1W2PRX2 142 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 PRSS38A1L453 326 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 PMS2P1A4D2B8 440 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 KDM1AO60341 852 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 PFKMP08237 780 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 MASP1P48740 699 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 PRKD1Q15139 912 aaPredicted RBP6.86□□□□□ -1.31
UBR1-205ENST00000564540 CXorf67Q86X51 503 aaPredicted RBP6.86□□□□□ -1.31
UBR1-205ENST00000564540 HIST1H2AHQ96KK5 128 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 HIST1H2AJQ99878 128 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 ANO3Q9BYT9 981 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 PPP2R3BQ9Y5P8 575 aa6.86□□□□□ -1.31
UBR1-205ENST00000564540 ST20-MTHFSA0A0A6YYL1 179 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 GOLGA8BA8MQT2 603 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 MAFGO15525 162 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 MAMDC4Q6UXC1 1216 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 FRMD7Q6ZUT3 714 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 ADGRE4PQ86SQ3 457 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 EDAQ92838 391 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 CAAP1Q9H8G2 361 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBR1-205ENST00000564540 TESMINQ9Y4I5 508 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 PCDHB6Q9Y5E3 794 aa6.85□□□□□ -1.31
UBR1-205ENST00000564540 DAPK3O43293 454 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 MANFP55145 182 aaKnown RBP6.84□□□□□ -1.31
UBR1-205ENST00000564540 GAREM2Q75VX8 874 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 D2HGDHQ8N465 521 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 CDYL2Q8N8U2 506 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 TTC1Q99614 292 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 FDXACB1Q9BRP7 624 aaPredicted RBP6.84□□□□□ -1.31
UBR1-205ENST00000564540 OSBPL6Q9BZF3 934 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 PRDM12Q9H4Q4 367 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 IL23AQ9NPF7 189 aa6.84□□□□□ -1.31
UBR1-205ENST00000564540 HECAQ9UBI9 543 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms