RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 ADAM2Q99965 735 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 FDXACB1Q9BRP7 624 aaPredicted RBP9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 XPNPEP1Q9NQW7 623 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 C1orf112Q9NSG2 853 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
NSMCE1-207ENST00000564342 A0A087WWV3 80 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 DENND3A2RUS2 1198 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 MED24O75448 989 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 STAG3L1P0CL83 205 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 FGFR4P22455 802 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 RARRES1P49788 294 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 GATMP50440 423 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 FAM189BP81408 668 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 CDC42EP1Q00587 391 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 EMC2Q15006 297 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 CCDC85BQ15834 202 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 SLC24A5Q71RS6 500 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 ZNF410Q86VK4 478 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 CATSPER3Q86XQ3 398 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 TMEM192Q8IY95 271 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 EXOC8Q8IYI6 725 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 CMTR2Q8IYT2 770 aaKnown RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 FBXO22Q8NEZ5 403 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 TMEM143Q96AN5 459 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 SCLT1Q96NL6 688 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 GCOM2Q9BZD3 368 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 IFT122Q9HBG6 1241 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 TUFT1Q9NNX1 390 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 ANKEF1Q9NU02 776 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 LRFN2Q9ULH4 789 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
NSMCE1-207ENST00000564342 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 H3BNC9 293 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 H3BQV1 296 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 GAS2O43903 313 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 CSDE1O75534 798 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 XRCC6P12956 609 aaKnown RBP eCLIP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 RPA1P27694 616 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 PTGDRQ13258 359 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 FERMT3Q86UX7 667 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 MICALL1Q8N3F8 863 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 TCP11Q8WWU5 503 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 PRPF31Q8WWY3 499 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 NLRP4Q96MN2 994 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 MTRQ99707 1265 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 POLR3CQ9BUI4 534 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 ELAC1Q9H777 363 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 PCDHB7Q9Y5E2 793 aa9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-207ENST00000564342 TCHHQ07283 1943 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 LAD1O00515 517 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ASAP2O43150 1006 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 DGAT1O75907 488 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 RB1P06400 928 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ZSCAN20P17040 1043 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 SFPQP23246 707 aaKnown RBP eCLIP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 CTNNB1P35222 781 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ARL2P36404 184 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 BMPR1AP36894 532 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 LAMTOR4Q0VGL1 99 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 GPM6BQ13491 265 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 IL17AQ16552 155 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 PAN2Q504Q3 1202 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 RILPL1Q5EBL4 403 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 FAM102BQ5T8I3 360 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 LARP1BQ659C4 914 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ECHDC2Q86YB7 292 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 INO80BQ9C086 356 aaPredicted RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 MINDY3Q9H8M7 445 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 RNF19AQ9NV58 838 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 LRWD1Q9UFC0 647 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 RWDD3Q9Y3V2 267 aa9.16□□□□□ -0.94
NSMCE1-207ENST00000564342 EYSQ5T1H1 3165 aa9.15□□□□□ -0.94
NSMCE1-207ENST00000564342 A0A0U1RQF3 1178 aa9.15□□□□□ -0.94
NSMCE1-207ENST00000564342 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.94
NSMCE1-207ENST00000564342 SRGAP2CP0DJJ0 459 aa9.15□□□□□ -0.94
NSMCE1-207ENST00000564342 FGFR1P11362 822 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms