RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 NOC2LQ9Y3T9 749 aaKnown RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 CHD7Q9P2D1 2997 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 PPP6R2O75170 966 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 SFPQP23246 707 aaKnown RBP eCLIP20.3■□□□□ 0.84
PKD1-227ENST00000564313 MARCKSP29966 332 aaPredicted RBP20.3■□□□□ 0.84
PKD1-227ENST00000564313 TXLNAP40222 546 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 POU5F1BQ06416 359 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 LAMTOR4Q0VGL1 99 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 NFX1Q12986 1120 aaKnown RBP20.3■□□□□ 0.84
PKD1-227ENST00000564313 HERC6Q8IVU3 1022 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 PRPF31Q8WWY3 499 aaKnown RBP20.3■□□□□ 0.84
PKD1-227ENST00000564313 NLRP4Q96MN2 994 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 NECAB3Q96P71 396 aaPredicted RBP20.3■□□□□ 0.84
PKD1-227ENST00000564313 CCSER1Q9C0I3 900 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 BMP2KQ9NSY1 1161 aaPredicted RBP20.3■□□□□ 0.84
PKD1-227ENST00000564313 ST3GAL5Q9UNP4 418 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 PCDHA11Q9Y5I1 949 aa20.3■□□□□ 0.84
PKD1-227ENST00000564313 A0A087WZ62 844 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 SPTLC2O15270 562 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 CYP11B2P19099 503 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 ARL2P36404 184 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 PCBP1Q15365 356 aaKnown RBP eCLIP20.29■□□□□ 0.84
PKD1-227ENST00000564313 ZRSR1Q15695 479 aaKnown RBP20.29■□□□□ 0.84
PKD1-227ENST00000564313 TMEM119Q4V9L6 283 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 SRGAP1Q7Z6B7 1085 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 FAM228AQ86W67 206 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 FDXACB1Q9BRP7 624 aaPredicted RBP20.29■□□□□ 0.84
PKD1-227ENST00000564313 TIPINQ9BVW5 301 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 C1QTNF1Q9BXJ1 281 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 CSRNP2Q9H175 543 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
PKD1-227ENST00000564313 C1orf112Q9NSG2 853 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 KCND2Q9NZV8 630 aa20.29■□□□□ 0.84
PKD1-227ENST00000564313 MYO9BQ13459 2157 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 A0A087WWV3 80 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.28■□□□□ 0.84
PKD1-227ENST00000564313 E9PMD0 336 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 PHKA2P46019 1235 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 RABGGTBP53611 331 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 DEFB103AP81534 67 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 GRIN1Q05586 938 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 GRB10Q13322 594 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 MYOCDQ8IZQ8 938 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 ZBED2Q9BTP6 218 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 NFKBIZQ9BYH8 718 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 POLR3FQ9H1D9 316 aaPredicted RBP20.28■□□□□ 0.84
PKD1-227ENST00000564313 IFT122Q9HBG6 1241 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 CCDC39Q9UFE4 941 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 GBF1Q92538 1859 aa20.28■□□□□ 0.84
PKD1-227ENST00000564313 REV3LO60673 3130 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 TCF20Q9UGU0 1960 aaKnown RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 DENND3A2RUS2 1198 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 ENPP3O14638 875 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 GJB5O95377 273 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 ZSCAN20P17040 1043 aaPredicted RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 NUCB2P80303 420 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 PPP2R5AQ15172 486 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.27■□□□□ 0.84
PKD1-227ENST00000564313 RNF149Q8NC42 400 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 KIFAP3Q92845 792 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 TOP1MTQ969P6 601 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 TFIP11Q9UBB9 837 aaKnown RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 YBX2Q9Y2T7 364 aaKnown RBP20.27■□□□□ 0.84
PKD1-227ENST00000564313 PTPRSQ13332 1948 aa20.27■□□□□ 0.84
PKD1-227ENST00000564313 TLL1O43897 1013 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 SRGAP2CP0DJJ0 459 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 IGFBP4P22692 258 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 FAM102BQ5T8I3 360 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 IFNLR1Q8IU57 520 aaPredicted RBP20.26■□□□□ 0.83
PKD1-227ENST00000564313 KSR1Q8IVT5 923 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 SYT2Q8N9I0 419 aaPredicted RBP20.26■□□□□ 0.83
PKD1-227ENST00000564313 ZNF668Q96K58 619 aaPredicted RBP20.26■□□□□ 0.83
PKD1-227ENST00000564313 TMX1Q9H3N1 280 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 CHST12Q9NRB3 414 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 DACT1Q9NYF0 836 aa20.26■□□□□ 0.83
PKD1-227ENST00000564313 STAG3L1P0CL83 205 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 BMP1P13497 986 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 MYOGP15173 224 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 GLRA2P23416 452 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 PTENP60484 403 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 KRT85P78386 507 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 KCNK18Q7Z418 384 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 ASAP3Q8TDY4 903 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 DRC1Q96MC2 740 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 RAD9AQ99638 391 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 RGS18Q9NS28 235 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 STK17AQ9UEE5 414 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 ZDHHC9Q9Y397 364 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 ARIH1Q9Y4X5 557 aaPredicted RBP20.25■□□□□ 0.83
PKD1-227ENST00000564313 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
PKD1-227ENST00000564313 TTC3P53804 2025 aa20.24■□□□□ 0.83
PKD1-227ENST00000564313 CUTAO60888 179 aa20.24■□□□□ 0.83
PKD1-227ENST00000564313 PLA2G4BP0C869 781 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms