RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ERVK-5Q9HDB9 667 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 C1orf112Q9NSG2 853 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 BLOC1S4Q9NUP1 217 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 SLC4A7Q9Y6M7 1214 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 H0YCG3 227 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 SMAD3P84022 425 aaKnown RBP18.49■□□□□ 0.55
RNF40-206ENST00000564260 C9orf50Q5SZB4 431 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 FAM102BQ5T8I3 360 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
RNF40-206ENST00000564260 OTOP2Q7RTS6 562 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 RNF149Q8NC42 400 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 SLC17A8Q8NDX2 589 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 NLRP4Q96MN2 994 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
RNF40-206ENST00000564260 AGO3Q9H9G7 860 aaKnown RBP18.49■□□□□ 0.55
RNF40-206ENST00000564260 BMP2KQ9NSY1 1161 aaPredicted RBP18.49■□□□□ 0.55
RNF40-206ENST00000564260 USP25Q9UHP3 1055 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 GINS2Q9Y248 185 aa18.49■□□□□ 0.55
RNF40-206ENST00000564260 A0A087WZ62 844 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 FAM237AA0A1B0GTK4 181 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 AMHP03971 560 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 GLRA2P23416 452 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 AXLP30530 894 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 CD52P31358 61 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 STAT6P42226 847 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 EFNA5P52803 228 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 WDR5P61964 334 aaKnown RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 GPR153Q6NV75 609 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 SHC4Q6S5L8 630 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 USP49Q70CQ1 688 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 SV2BQ7L1I2 683 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 FAM228AQ86W67 206 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 ZBTB8OSQ8IWT0 167 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 TMEM40Q8WWA1 233 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 CCDC51Q96ER9 411 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 FDXACB1Q9BRP7 624 aaPredicted RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 NTPCRQ9BSD7 190 aaKnown RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 TNMDQ9H2S6 317 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 TSHZ2Q9NRE2 1034 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 DACT1Q9NYF0 836 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 LARSQ9P2J5 1176 aaKnown RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 ST3GAL5Q9UNP4 418 aa18.48■□□□□ 0.55
RNF40-206ENST00000564260 NOC2LQ9Y3T9 749 aaKnown RBP18.48■□□□□ 0.55
RNF40-206ENST00000564260 AMPD3Q01432 767 aa18.47■□□□□ 0.55
RNF40-206ENST00000564260 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
RNF40-206ENST00000564260 CAPSQ13938 189 aa18.47■□□□□ 0.55
RNF40-206ENST00000564260 SPECC1Q5M775 1068 aa18.47■□□□□ 0.55
RNF40-206ENST00000564260 SPIRE2Q8WWL2 714 aa18.47■□□□□ 0.55
RNF40-206ENST00000564260 CDHR5Q9HBB8 845 aa18.47■□□□□ 0.55
RNF40-206ENST00000564260 TMEM265A0A087WTH1 108 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 A0A087WWV3 80 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 ZBBXA8MT70 800 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 SSBP05455 408 aaKnown RBP eCLIP18.46■□□□□ 0.55
RNF40-206ENST00000564260 SRGAP2CP0DJJ0 459 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 SKIP12755 728 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 ATP2A2P16615 1042 aaKnown RBP18.46■□□□□ 0.55
RNF40-206ENST00000564260 ZSCAN20P17040 1043 aaPredicted RBP18.46■□□□□ 0.55
RNF40-206ENST00000564260 ZNF131P52739 623 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 SMTNP53814 917 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
RNF40-206ENST00000564260 FAM187BQ17R55 369 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 NAALADL2Q58DX5 795 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 CNNM4Q6P4Q7 775 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 ASAP3Q8TDY4 903 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 RUSC1Q9BVN2 902 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 RGS18Q9NS28 235 aa18.46■□□□□ 0.55
RNF40-206ENST00000564260 PRMT7Q9NVM4 692 aaPredicted RBP18.46■□□□□ 0.55
RNF40-206ENST00000564260 HIP1RO75146 1068 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 MYL1P05976 194 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 PLS3P13797 630 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 RAB30Q15771 203 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 E2F4Q16254 413 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
RNF40-206ENST00000564260 SLC24A5Q71RS6 500 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 GPBP1Q86WP2 473 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 KSR1Q8IVT5 923 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 TOP1MTQ969P6 601 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 PLIN2Q99541 437 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 ELAC1Q9H777 363 aaKnown RBP18.45■□□□□ 0.54
RNF40-206ENST00000564260 GPRC5CQ9NQ84 441 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 AGPAT5Q9NUQ2 364 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 KBTBD4Q9NVX7 518 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 CXXC1Q9P0U4 656 aaPredicted RBP18.45■□□□□ 0.54
RNF40-206ENST00000564260 SEL1LQ9UBV2 794 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 KCNH3Q9ULD8 1083 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 HPSEQ9Y251 543 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 EVPLQ92817 2033 aa18.45■□□□□ 0.54
RNF40-206ENST00000564260 SIP14410 1827 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 DENND3A2RUS2 1198 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 LRRIQ4A6NIV6 560 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 ENPP3O14638 875 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 ERLIN2O94905 339 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 STAG3L1P0CL83 205 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms