RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FGFR1OPO95684 399 aaKnown RBP19.39■□□□□ 0.69
GDE1-203ENST00000564172 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.69
GDE1-203ENST00000564172 ZC2HC1CQ53FD0 456 aaPredicted RBP19.39■□□□□ 0.69
GDE1-203ENST00000564172 LRRC55Q6ZSA7 311 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 REXO1L1PQ8IX06 675 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 MSL3Q8N5Y2 521 aaKnown RBP19.39■□□□□ 0.69
GDE1-203ENST00000564172 CNOT6LQ96LI5 555 aaKnown RBP19.39■□□□□ 0.69
GDE1-203ENST00000564172 VPS16Q9H269 839 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 TAB2Q9NYJ8 693 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 IMPACTQ9P2X3 320 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 DGAT1O75907 488 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 HOXC6P09630 235 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 PLS3P13797 630 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 KCNA1Q09470 495 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 NOGQ13253 232 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 ABHD16BQ9H3Z7 469 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 AZI2Q9H6S1 392 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 KCND1Q9NSA2 647 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 TRAF3IP3Q9Y228 551 aa19.39■□□□□ 0.69
GDE1-203ENST00000564172 DOCK3Q8IZD9 2030 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 MYH9P35579 1960 aaKnown RBP19.38■□□□□ 0.69
GDE1-203ENST00000564172 N4BP3O15049 544 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 LGR5O75473 907 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 ARHGAP1Q07960 439 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 MTERF2Q49AM1 385 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 GJC2Q5T442 439 aaPredicted RBP19.38■□□□□ 0.69
GDE1-203ENST00000564172 FAM102BQ5T8I3 360 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 TMCO3Q6UWJ1 677 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 ZNF592Q92610 1267 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 USP6NLQ92738 828 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 FAM210AQ96ND0 272 aa19.38■□□□□ 0.69
GDE1-203ENST00000564172 NIFKQ9BYG3 293 aaKnown RBP19.38■□□□□ 0.69
GDE1-203ENST00000564172 PDXKO00764 312 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 POLR3GO15318 223 aaPredicted RBP19.37■□□□□ 0.69
GDE1-203ENST00000564172 MAPTP10636 758 aaKnown RBP19.37■□□□□ 0.69
GDE1-203ENST00000564172 ACVR2BQ13705 512 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 EDRF1Q3B7T1 1238 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 EFCAB13Q8IY85 973 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 STRA6Q9BX79 667 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 NRBP2Q9NSY0 501 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 PCDHB13Q9Y5F0 798 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 ZNF236Q9UL36 1845 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 DEFB115Q30KQ5 88 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 LEKR1Q6ZMV7 388 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 STXBP4Q6ZWJ1 553 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 MCPH1Q8NEM0 835 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 GLG1Q92896 1179 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 TUBGCP2Q9BSJ2 902 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 L2HGDHQ9H9P8 463 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 XPNPEP1Q9NQW7 623 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 GJD2Q9UKL4 321 aa19.37■□□□□ 0.69
GDE1-203ENST00000564172 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.36■□□□□ 0.69
GDE1-203ENST00000564172 ANKRD33BA6NCL7 494 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 PPP1R37O75864 691 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 GH1P01241 217 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 USP8P40818 1118 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 PLPPR4Q7Z2D5 763 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 ZC3H3Q8IXZ2 948 aaKnown RBP19.36■□□□□ 0.69
GDE1-203ENST00000564172 TYW1Q9NV66 732 aaKnown RBP19.36■□□□□ 0.69
GDE1-203ENST00000564172 RASSF10A6NK89 507 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 TNPO2O14787 897 aaKnown RBP19.36■□□□□ 0.69
GDE1-203ENST00000564172 NKRFO15226 690 aaKnown RBP eCLIP19.36■□□□□ 0.69
GDE1-203ENST00000564172 AOC2O75106 756 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 PBX1P40424 430 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 PEX3P56589 373 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 TRIM50Q86XT4 487 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 KSR1Q8IVT5 923 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 KIFAP3Q92845 792 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 CEP63Q96MT8 703 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 ATP6V0A4Q9HBG4 840 aa19.36■□□□□ 0.69
GDE1-203ENST00000564172 UBE4BO95155 1302 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 EMSYQ7Z589 1322 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 K7ENM7 598 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 TGFB1I1O43294 461 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 SOX10P56693 466 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 ADAM9Q13443 819 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 BIRC2Q13490 618 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 ARID5BQ14865 1188 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 PPP2R5AQ15172 486 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 TARBP2Q15633 366 aaKnown RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 SPECC1LQ69YQ0 1117 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 EMID1Q96A84 441 aaPredicted RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 FAM212AQ96EL1 285 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 CAPNS2Q96L46 248 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 DHX33Q9H6R0 707 aaKnown RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 FLRT1Q9NZU1 646 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 MYH11P35749 1972 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 CALUO43852 315 aaPredicted RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 CYP2B6P20813 491 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 CTGFP29279 349 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 MTIF2P46199 727 aaKnown RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 POLGP54098 1239 aaPredicted RBP19.35■□□□□ 0.69
GDE1-203ENST00000564172 GSDMDP57764 484 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 CACTINQ8WUQ7 758 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms