RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ADCYAP1R1P41586 468 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 SESN2P58004 480 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-201ENST00000563416 PHC1P78364 1004 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 DGKDQ16760 1214 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 ZNF827Q17R98 1081 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-201ENST00000563416 RNF180Q86T96 592 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 RTF1Q92541 710 aaKnown RBP6.76□□□□□ -1.33
LINC00254-201ENST00000563416 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 SPTLC3Q9NUV7 552 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 KCMF1Q9P0J7 381 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 SAE1Q9UBE0 346 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-201ENST00000563416 VWA7Q9Y334 891 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 MAP3K1Q13233 1512 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 ZMYM4Q5VZL5 1548 aa6.76□□□□□ -1.33
LINC00254-201ENST00000563416 FANCAO15360 1455 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 PHLDB1Q86UU1 1377 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 PLEKHD1A6NEE1 506 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 B8ZZF3 427 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 ZEB2O60315 1214 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 APOL3O95236 402 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 CPEP16870 476 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 CDK11BP21127 795 aaKnown RBP6.75□□□□□ -1.33
LINC00254-201ENST00000563416 MASP1P48740 699 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 RAC3P60763 192 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 SMAD3P84022 425 aaKnown RBP6.75□□□□□ -1.33
LINC00254-201ENST00000563416 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 USP30Q70CQ3 517 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 CIR1Q86X95 450 aaPredicted RBP6.75□□□□□ -1.33
LINC00254-201ENST00000563416 TTC1Q99614 292 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 IFT22Q9H7X7 185 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 FAM184BQ9ULE4 1060 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 SYNPO2Q9UMS6 1093 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 PTPN22Q9Y2R2 807 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 NR2E1Q9Y466 385 aa6.75□□□□□ -1.33
LINC00254-201ENST00000563416 ST20-MTHFSA0A0A6YYL1 179 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 TGM5O43548 720 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 H2AFYO75367 372 aaKnown RBP6.74□□□□□ -1.33
LINC00254-201ENST00000563416 PRPF6O94906 941 aaKnown RBP6.74□□□□□ -1.33
LINC00254-201ENST00000563416 CNOT4O95628 575 aaKnown RBP6.74□□□□□ -1.33
LINC00254-201ENST00000563416 MRE11P49959 708 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 STAT5BP51692 787 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 PCOLCEQ15113 449 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 AGBL4Q5VU57 503 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ESPNLQ6ZVH7 1005 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 BMP8AQ7Z5Y6 402 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 FILIP1Q7Z7B0 1213 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 OR5AN1Q8NGI8 311 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 LPPQ93052 612 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 LMF1Q96S06 567 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 RBM15Q96T37 977 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC00254-201ENST00000563416 POFUT1Q9H488 388 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 MSL2Q9HCI7 577 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 EMC7Q9NPA0 242 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 PPP4R1LQ9P1A2 415 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ABCC1P33527 1531 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ARHGEF40Q8TER5 1519 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 PLCH2O75038 1416 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
LINC00254-201ENST00000563416 ARHGAP6O43182 974 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 ULK1O75385 1050 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 CNGA1P29973 690 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 STRN3Q13033 797 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 NFYCQ13952 458 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 NOLC1Q14978 699 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 DDB1Q16531 1140 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 LARP4Q71RC2 724 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 FAM177A1Q8N128 213 aaPredicted RBP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 SAMD11Q96NU1 681 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 KIAA1683Q9H0B3 1180 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 PUF60Q9UHX1 559 aaKnown RBP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 MSRAQ9UJ68 235 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 DENND2AQ9ULE3 1009 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 APOBEC2Q9Y235 224 aaKnown RBP6.73□□□□□ -1.33
LINC00254-201ENST00000563416 KDM5CP41229 1560 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 SIGLEC1Q9BZZ2 1709 aa6.73□□□□□ -1.33
LINC00254-201ENST00000563416 ARHGAP5Q13017 1502 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 BPIP17213 487 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 TERF2Q15554 542 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 SPATS1Q496A3 300 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 FRMD7Q6ZUT3 714 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 KRT26Q7Z3Y9 468 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms