RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 KIZQ2M2Z5 673 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 PPFIBP1Q86W92 1011 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 HELQQ8TDG4 1101 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 TNPO1Q92973 898 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 TMEM169Q96HH4 297 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 IGSF21Q96ID5 467 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 KLHL5Q96PQ7 755 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 PPP1R16BQ96T49 567 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 UBAC1Q9BSL1 405 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 DDX23Q9BUQ8 820 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 WDR6Q9NNW5 1121 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 SLC2A4RGQ9NR83 387 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 SLC9A2Q9UBY0 812 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 FBXO4Q9UKT5 387 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 SMG5Q9UPR3 1016 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 CEP295Q9C0D2 2601 aa8.84□□□□□ -1
HERPUD1-206ENST00000563343 CLUHO75153 1309 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 NFASCO94856 1347 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 ZFYVE26Q68DK2 2539 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 ANHXE9PGG2 379 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 MAFGO15525 162 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 HBP1O60381 514 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 B4GALT3O60512 393 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 C22orf31O95567 290 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 VTNP04004 478 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 CNPP09543 421 aaKnown RBP8.83□□□□□ -1
HERPUD1-206ENST00000563343 ATP4AP20648 1035 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 CA8P35219 290 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 SLC26A2P50443 739 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 ITGB3BPQ13352 177 aaPredicted RBP8.83□□□□□ -1
HERPUD1-206ENST00000563343 PPM1JQ5JR12 505 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 DCLRE1AQ6PJP8 1040 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 ABI1Q8IZP0 508 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 LINC01465Q8N7H1 131 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 CHAMP1Q96JM3 812 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 KRT23Q9C075 422 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 AZI2Q9H6S1 392 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 PCDHGA2Q9Y5H1 932 aa8.83□□□□□ -1
HERPUD1-206ENST00000563343 CNOT1A5YKK6 2376 aaKnown RBP8.83□□□□□ -1
HERPUD1-206ENST00000563343 A0A0U1RQF3 1178 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 SLC30A4O14863 429 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 CCNE2O96020 404 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 GALTP07902 379 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 RFX1P22670 979 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 GBP2P32456 591 aaPredicted RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 ALDH7A1P49419 539 aaKnown RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 HTR4Q13639 388 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 BMS1Q14692 1282 aaKnown RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 NONOQ15233 471 aaKnown RBP eCLIP8.82□□□□□ -1
HERPUD1-206ENST00000563343 CCDC60Q8IWA6 550 aaPredicted RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 CUL5Q93034 780 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 MRPL9Q9BYD2 267 aaKnown RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 ADAMTS10Q9H324 1103 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 NRDE2Q9H7Z3 1164 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 KCNH7Q9NS40 1196 aa8.82□□□□□ -1
HERPUD1-206ENST00000563343 PDCD11Q14690 1871 aaKnown RBP8.82□□□□□ -1
HERPUD1-206ENST00000563343 NBEAQ8NFP9 2946 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 LAMTOR5O43504 91 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 ZC3H11AO75152 810 aaKnown RBP eCLIP8.81□□□□□ -1
HERPUD1-206ENST00000563343 LAMP2P13473 410 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 SDSP20132 328 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 PMLP29590 882 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 ACAP1Q15027 740 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 UBE2SQ16763 222 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 ZNF484Q5JVG2 852 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 ABHD15Q6UXT9 468 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 CYP26C1Q6V0L0 522 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 ZNF707Q96C28 371 aaPredicted RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 MXRA8Q9BRK3 442 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 RPP25Q9BUL9 199 aaKnown RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 DSCC1Q9BVC3 393 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 SPZ1Q9BXG8 430 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 CNNM2Q9H8M5 875 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 MAN1C1Q9NR34 630 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 SPATA6Q9NWH7 488 aaPredicted RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 ZSCAN32Q9NX65 697 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 DNAJB4Q9UDY4 337 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 USP18Q9UMW8 372 aa8.81□□□□□ -1
HERPUD1-206ENST00000563343 MTF2Q9Y483 593 aaPredicted RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 SETXQ7Z333 2677 aaKnown RBP8.81□□□□□ -1
HERPUD1-206ENST00000563343 WDFY3Q8IZQ1 3526 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 KANSL1LA0AUZ9 987 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 MEIS3P2A8K0S8 358 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 INPPL1O15357 1258 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 TBC1D4O60343 1298 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 RFPL2O75678 378 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 EFEMP2O95967 443 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 TDGF1P13385 188 aa8.8□□□□□ -1
HERPUD1-206ENST00000563343 ZSCAN20P17040 1043 aaPredicted RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 EIF4BP23588 611 aaKnown RBP8.8□□□□□ -1
HERPUD1-206ENST00000563343 KLRC2P26717 231 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms